Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq59859 733 0.0 seq271877 298 2e-78 seq17401 125 2e-26 seq958548 113 1e-22 seq34243 113 1e-22 seq13003 109 2e-21 seq165534 96.9 1e-17 seq60636 87.8 5e-15 >seq59859 Length=9336 Score = 733 bits (812), Expect = 0.0 Identities = 471/508 (93%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 7175 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 7234 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7235 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 7294 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 7295 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 7354 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7355 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 7414 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 7415 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 7472 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 7473 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 7532 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 7533 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 7592 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 7593 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 7652 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 7653 TTTGAGACAAGCATATGACTACTGGCAG 7680 >seq271877 Length=411 Score = 298 bits (330), Expect = 2e-78 Identities = 324/416 (78%), Gaps = 19/416 (5%) Strand=Plus/Minus Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 411 CTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTT 352 Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 |||||||| |||||||||| || || |||||||| ||||||||||||||||| |||| Sbjct 351 ACCCGTTGCAACCATGGTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTT 292 Query 222 GAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA- 275 ||| || | ||| ||| |||| |||| ||| || | ||||| || | || || Sbjct 291 GAAAGATCTGTCGTCGGTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAA 233 Query 276 -CCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG-- 331 || || | | || |||| |||| |||||||| ||| | || ||| Sbjct 232 TATAACGATCTTGCGATCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGT 175 Query 332 TCGGGGTTT-TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT- 389 || | ||| | |||||||||||||||||||||||||| |||||||| ||| | || Sbjct 174 TCATGTTTTAATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTT 117 Query 390 -ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTG 448 || ||| || ||| ||||||||| ||||||||| || || |||||||| | || | | Sbjct 116 AACGATCTAAGGAACCATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATTCG 58 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 57 TGTGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 2 >seq17401 Length=51170 Score = 125 bits (138), Expect = 2e-26 Identities = 131/168 (78%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA----GTAAGGTACTATCAAAT 399 ||||||||||||||| ||||||||||||||||||| ||| || ||| | | | | Sbjct 50223 GCATGTATTAGCTCTGGAATTACCACGGTTATCCAAGTACACCGTGAGGACGGACCCATT 50282 Query 400 AA-ACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC--TGTATAGATTGCTTATACT 456 || | |||||||||||||||| | ||| || || | |||| | | ||| |||| Sbjct 50283 TGGACCAAGACTGATTTAATGAGCCGTCCGCGGTATCGCCGTGTAAACACAGCTCGTACT 50342 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| |||||| ||||||||||| |||||||||| Sbjct 50343 TAGACATGCATGGCTTAGCCTTTGAAACAAGCATATG-CTACTGGCAG 50389 Score = 87.8 bits (96), Expect = 5e-15 Identities = 93/118 (79%), Gaps = 6/118 (5%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGAC-CCAAAAG-AGC-CCTGTATCAGTATTTATTGTCACTAC 58 |||||||| | ||| | | | ||||||| ||| || | ||| ||||| | |||||||| Sbjct 49678 TACTCATTTCGATTGCGGGGCTCCAAAAGGAGCGCCCGCATCGTTATTTTTCGTCACTAC 49737 Query 59 CTCCCC---GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 113 |||||| || |||||||||||||||||| |||||||||| ||||| || ||||| Sbjct 49738 CTCCCCAGAGTTCTGGGATTGGGTAATTTGCGTGCCTGCTGCCGTCCTTAGACGTGGT 49795 >seq958548 Length=1148 Score = 113 bits (124), Expect = 1e-22 Identities = 128/168 (76%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG---TAAGGTACTATCAAAT- 399 ||||||||||||||| |||||||||||||||| | ||| | | ||| | || Sbjct 269 GCATGTATTAGCTCTGGAATTACCACGGTTATTGAAGTATACCTTGAGAACTGACCCATT 328 Query 400 -AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC--TGTATAGATTGCTTATACT 456 | || | |||||||||||||||| | ||| || || | | || | | ||| |||| Sbjct 329 TAGACCACGACTGATTTAATGAGCCGTCCGCGGTATCGCCATCTAAACACAGCTCGTACT 388 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| |||||| ||||||||||| |||||||||| Sbjct 389 TAGACATGCATGGCTTAGCCTTTGAAACAAGCATATG-CTACTGGCAG 435 >seq34243 Length=22957 Score = 113 bits (124), Expect = 1e-22 Identities = 128/168 (76%), Gaps = 8/168 (5%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG---TAAGGTACTATCAAAT- 399 ||||||||||||||| |||||||||||||||| || ||| | | ||| | || Sbjct 18842 GCATGTATTAGCTCTGGAATTACCACGGTTATTCAAGTATACCTTGAGAACTGACCCATT 18783 Query 400 -AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC--TGTATAGATTGCTTATACT 456 | || | |||||||||||||||| | ||| || || | | || | | ||| |||| Sbjct 18782 TAGACCACGACTGATTTAATGAGCCGTCCGCGGTATCGCCATCTAAACACAGCTCGTACT 18723 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| |||||| |||| |||||| |||||||||| Sbjct 18722 TAGACATGCATGGCTTAGCCTTTGAAACAAACATATG-CTACTGGCAG 18676 >seq13003 Length=67442 Score = 109 bits (120), Expect = 2e-21 Identities = 125/164 (76%), Gaps = 7/164 (4%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGGTACTATCAAATAAA 402 ||||||||||||| | ||||||| ||||||||||| || || | || | || | | Sbjct 48205 GCATGTATTAGCTTTGGAATTACTACGGTTATCCAGGTGAGGACGGACCCATT---TGGA 48149 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG--TATAGATTGCTTATACTTAGA 460 | | ||||||||||||||| ||||| || || | | || | | ||| |||||||| Sbjct 48148 CCACGACTGATTTAATGAGCTGTTCGCGGTATCGCCGGGTAAACACAGCTGGTACTTAGA 48089 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||| |||| | ||||||||||| ||||| |||| Sbjct 48088 CATGCATGGCTTAGCCTTTAAAACAAGCATATG-CTACTAGCAG 48046 >seq165534 Length=771 Score = 96.9 bits (106), Expect = 1e-17 Identities = 82/99 (83%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCAC--TGTATAGATTGCTTATACTTAGACATGC 465 |||||||||||||||| | ||| || || | |||| | | ||| ||||||||||||| Sbjct 5 ACTGATTTAATGAGCCGTCCGCGGTATCGCCGTGTAAACACAGCTCGTACTTAGACATGC 64 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||| |||||| ||||||||||| |||||||||| Sbjct 65 ATGGCTTAGCCTTTGAAACAAGCATATG-CTACTGGCAG 102 >seq60636 Length=15922 Score = 87.8 bits (96), Expect = 5e-15 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 70 GGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGG 127 |||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||| Sbjct 1757 GGGATTGGGTAATTTGCGTGCCTGCTGCCATCCTTAGACGTGGTAGCCGTTTCTCAGG 1814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495647998720