Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11]
976,695 sequences; 4,023,757,376 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3070 104 2e-17
seq7011 89.7 4e-13
>seq3070
Length=111036
Score = 104 bits (114), Expect = 2e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093
|| ||||||||||| | ||||| |||||||| ||||| || || ||| || ||
Sbjct 47665 TACCTCGTCAGGAGAAGAGTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGT 47606
Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153
||| | |||||||||||| |||||||| || || || |||||||||| |||||| || ||
Sbjct 47605 GCCTAGATTCTGTTGATTGCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGT 47546
Query 66154 GCCGGTCTCAACTTG 66168
|| ||||| || ||
Sbjct 47545 TCCTGTCTCCACCTG 47531
Score = 104 bits (114), Expect = 2e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093
|| ||||||||||| | ||||| |||||||| ||||| || || ||| || ||
Sbjct 89587 TACCTCGTCAGGAGAAGAGTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGT 89528
Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153
||| | |||||||||||| |||||||| || || || |||||||||| |||||| || ||
Sbjct 89527 GCCTAGATTCTGTTGATTGCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGT 89468
Query 66154 GCCGGTCTCAACTTG 66168
|| ||||| || ||
Sbjct 89467 TCCTGTCTCCACCTG 89453
>seq7011
Length=120798
Score = 89.7 bits (98), Expect = 4e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || ||||| | |||||| || || || ||| | ||||| ||| ||
Sbjct 26910 GCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCCTCCATCTTCTGGCTG 26969
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| || || || |||||||| |||||||||||||| ||| | || || || ||||||
Sbjct 26970 AAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGAGCTTATCTCCCGGGACGAG 27029
Query 61618 GG 61619
||
Sbjct 27030 GG 27031
Score = 86.0 bits (94), Expect = 5e-12
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336
|||| ||| | || || || || |||||||| |||||||| ||||||||||| | ||||
Sbjct 25610 TGCAGGTGCCAGAAGCACGCTGCTTCTACGGGTTCCAGATCGCCATGGAGAACATTCACT 25669
Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT 61396
| |||||||||||| | || ||| | || ||| || || || || | ||
Sbjct 25670 CCGAGATGTACAGTCTGCTGATCAACACCTACGTCTCCGACACCGCCGAGCAGACGAGAC 25729
Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453
| ||||| ||||||||||| || || | ||| ||| || || |||||| |||
Sbjct 25730 TCTTCAACGCCATCGAGACCATGCCCTGTATTAAGAAGAAGGCAGACTGGGCCCTCA 25786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 392835561114800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |