Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parhyale_20hawaiensis_20[genbank_20GCA_5F001587735.1_202016-03-11] 976,695 sequences; 4,023,757,376 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3070 104 2e-17 seq7011 89.7 4e-13 >seq3070 Length=111036 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 || ||||||||||| | ||||| |||||||| ||||| || || ||| || || Sbjct 47665 TACCTCGTCAGGAGAAGAGTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGT 47606 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||| | |||||||||||| |||||||| || || || |||||||||| |||||| || || Sbjct 47605 GCCTAGATTCTGTTGATTGCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGT 47546 Query 66154 GCCGGTCTCAACTTG 66168 || ||||| || || Sbjct 47545 TCCTGTCTCCACCTG 47531 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 || ||||||||||| | ||||| |||||||| ||||| || || ||| || || Sbjct 89587 TACCTCGTCAGGAGAAGAGTACTCAACAATTTCTGTGCAGAGGTTGGAGCATTTGATAGT 89528 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||| | |||||||||||| |||||||| || || || |||||||||| |||||| || || Sbjct 89527 GCCTAGATTCTGTTGATTGCTCTTGCGGTTACACGCGTCCTTGTACAGCATGTAGGGGGT 89468 Query 66154 GCCGGTCTCAACTTG 66168 || ||||| || || Sbjct 89467 TCCTGTCTCCACCTG 89453 >seq7011 Length=120798 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || ||||| | |||||| || || || ||| | ||||| ||| || Sbjct 26910 GCCTTTGCCGCAGTTGAGGGAATCTTTTTCTCCGGGTCCTTCGCCTCCATCTTCTGGCTG 26969 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| |||||||||||||| ||| | || || || |||||| Sbjct 26970 AAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGAGCTTATCTCCCGGGACGAG 27029 Query 61618 GG 61619 || Sbjct 27030 GG 27031 Score = 86.0 bits (94), Expect = 5e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336 |||| ||| | || || || || |||||||| |||||||| ||||||||||| | |||| Sbjct 25610 TGCAGGTGCCAGAAGCACGCTGCTTCTACGGGTTCCAGATCGCCATGGAGAACATTCACT 25669 Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT 61396 | |||||||||||| | || ||| | || ||| || || || || | || Sbjct 25670 CCGAGATGTACAGTCTGCTGATCAACACCTACGTCTCCGACACCGCCGAGCAGACGAGAC 25729 Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | ||||| ||||||||||| || || | ||| ||| || || |||||| ||| Sbjct 25730 TCTTCAACGCCATCGAGACCATGCCCTGTATTAAGAAGAAGGCAGACTGGGCCCTCA 25786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392835561114800