Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pediculus_20humanus_20corporis_20[refseq_20GCF_5F000006295.1_202007-
04-23] 1,882 sequences; 110,781,312 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1616 230 4e-58
seq1512 230 4e-58
seq1448 230 4e-58
seq1415 230 4e-58
seq1111 230 4e-58
seq988 230 4e-58
seq1701 224 1e-56
seq1202 78.8 1e-12
>seq1616
Length=409602
Score = 230 bits (254), Expect = 4e-58
Identities = 212/260 (82%), Gaps = 9/260 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 401054 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 400997
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | ||||||||||| | ||||| ||||||| | || ||||| | ||
Sbjct 400996 CTAGTTCACGGGAAACAATTGCAAGCCCCGATCCCTATCACGAAGGAAATTCAACGGGTT 400937
Query 120 ACCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||||| |||||| ||| | |||| |||||| | | |||||||||| |||||
Sbjct 400936 GCCCGGACCTCTCGGCCTAGGATTCGTCAGACACGTTGATTCCTTCAGTGTAGCACGCGT 400877
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||| ||||| || || || |||
Sbjct 400876 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGCGG-CTA 400819
Query 237 AAAGGC-CATCTCCCTCGAA 255
||| | | | |||||| ||
Sbjct 400818 GAAGCCGCTTGTCCCTCTAA 400799
>seq1512
Length=772936
Score = 230 bits (254), Expect = 4e-58
Identities = 212/260 (82%), Gaps = 9/260 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 766846 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 766789
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | ||||||||||| | ||||| ||||||| | || ||||| | ||
Sbjct 766788 CTAGTTCACGGGAAACAATTGCAAGCCCCGATCCCTATCACGAAGGAAATTCAACGGGTT 766729
Query 120 ACCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||||| |||||| ||| | |||| |||||| | | |||||||||| |||||
Sbjct 766728 GCCCGGACCTCTCGGCCTAGGATTCGTCAGACACGTTGATTCCTTCAGTGTAGCACGCGT 766669
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||| ||||| || || || |||
Sbjct 766668 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGCGG-CTA 766611
Query 237 AAAGGC-CATCTCCCTCGAA 255
||| | | | |||||| ||
Sbjct 766610 GAAGCCGCTTGTCCCTCTAA 766591
>seq1448
Length=203205
Score = 230 bits (254), Expect = 4e-58
Identities = 212/260 (82%), Gaps = 9/260 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 475 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 532
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | ||||||||||| | ||||| ||||||| | || ||||| | ||
Sbjct 533 CTAGTTCACGGGAAACAATTGCAAGCCCCGATCCCTATCACGAAGGAAATTCAACGGGTT 592
Query 120 ACCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||||| |||||| ||| | |||| |||||| | | |||||||||| |||||
Sbjct 593 GCCCGGACCTCTCGGCCTAGGATTCGTCAGACACGTTGATTCCTTCAGTGTAGCACGCGT 652
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||| ||||| || || || |||
Sbjct 653 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGCGG-CTA 710
Query 237 AAAGGC-CATCTCCCTCGAA 255
||| | | | |||||| ||
Sbjct 711 GAAGCCGCTTGTCCCTCTAA 730
>seq1415
Length=153668
Score = 230 bits (254), Expect = 4e-58
Identities = 212/260 (82%), Gaps = 9/260 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 476 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 533
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | ||||||||||| | ||||| ||||||| | || ||||| | ||
Sbjct 534 CTAGTTCACGGGAAACAATTGCAAGCCCCGATCCCTATCACGAAGGAAATTCAACGGGTT 593
Query 120 ACCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||||| |||||| ||| | |||| |||||| | | |||||||||| |||||
Sbjct 594 GCCCGGACCTCTCGGCCTAGGATTCGTCAGACACGTTGATTCCTTCAGTGTAGCACGCGT 653
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||| ||||| || || || |||
Sbjct 654 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGCGG-CTA 711
Query 237 AAAGGC-CATCTCCCTCGAA 255
||| | | | |||||| ||
Sbjct 712 GAAGCCGCTTGTCCCTCTAA 731
>seq1111
Length=160291
Score = 230 bits (254), Expect = 4e-58
Identities = 212/260 (82%), Gaps = 9/260 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 4079 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 4022
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | ||||||||||| | ||||| ||||||| | || ||||| | ||
Sbjct 4021 CTAGTTCACGGGAAACAATTGCAAGCCCCGATCCCTATCACGAAGGAAATTCAACGGGTT 3962
Query 120 ACCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||||| |||||| ||| | |||| |||||| | | |||||||||| |||||
Sbjct 3961 GCCCGGACCTCTCGGCCTAGGATTCGTCAGACACGTTGATTCCTTCAGTGTAGCACGCGT 3902
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||| ||||| || || || |||
Sbjct 3901 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGCGG-CTA 3844
Query 237 AAAGGC-CATCTCCCTCGAA 255
||| | | | |||||| ||
Sbjct 3843 GAAGCCGCTTGTCCCTCTAA 3824
>seq988
Length=512285
Score = 230 bits (254), Expect = 4e-58
Identities = 212/260 (82%), Gaps = 9/260 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 23709 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 23766
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | ||||||||||| | ||||| ||||||| | || ||||| | ||
Sbjct 23767 CTAGTTCACGGGAAACAATTGCAAGCCCCGATCCCTATCACGAAGGAAATTCAACGGGTT 23826
Query 120 ACCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||||| |||||| ||| | |||| |||||| | | |||||||||| |||||
Sbjct 23827 GCCCGGACCTCTCGGCCTAGGATTCGTCAGACACGTTGATTCCTTCAGTGTAGCACGCGT 23886
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||| ||||| || || || |||
Sbjct 23887 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGCGG-CTA 23944
Query 237 AAAGGC-CATCTCCCTCGAA 255
||| | | | |||||| ||
Sbjct 23945 GAAGCCGCTTGTCCCTCTAA 23964
>seq1701
Length=264565
Score = 224 bits (248), Expect = 1e-56
Identities = 211/260 (81%), Gaps = 9/260 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 258130 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 258073
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|| ||| | | ||||||||||| | ||||| ||||||| | || ||||| | ||
Sbjct 258072 CTAGTTCACGGGAAACAATTGCAAGCCCCGATCCCTATCACGAAGGAAATTCAACGGGTT 258013
Query 120 ACCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
||||||||| |||||| ||| | | || |||||| | | |||||||||| |||||
Sbjct 258012 GCCCGGACCTCTCGGCCTAGGATTCGTCAAACACGTTGATTCCTTCAGTGTAGCACGCGT 257953
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||| ||||| || || || |||
Sbjct 257952 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGCGG-CTA 257895
Query 237 AAAGGC-CATCTCCCTCGAA 255
||| | | | |||||| ||
Sbjct 257894 GAAGCCGCTTGTCCCTCTAA 257875
>seq1202
Length=3420
Score = 78.8 bits (86), Expect = 1e-12
Identities = 53/57 (93%), Gaps = 2/57 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAAT 57
|||||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||
Sbjct 3351 GTACAAAGGGCAGG-ACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAAT 3405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751986289630
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |