Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pediculus_20humanus_20corporis_20[refseq_20GCF_5F000006295.1_202007- 04-23] 1,882 sequences; 110,781,312 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1701 87.8 1e-15 seq1616 87.8 1e-15 seq1512 87.8 1e-15 seq1448 87.8 1e-15 seq1415 87.8 1e-15 seq1111 87.8 1e-15 seq988 87.8 1e-15 >seq1701 Length=264565 Score = 87.8 bits (96), Expect = 1e-15 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 |||||| ||| ||||| |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 257528 GAACCCGAAGGCTTTGGTTTCCCTCAAGCTGCCCGCCGAATCATC-TGAACGAACATCGA 257470 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||| |||| |||||||||||||||| | |||| | ||||||||||||| |||||| Sbjct 257469 CGGATCGCTAGCCGGCATAGTTTACGGTAAGAACTAGGGCGGTATCTGATCGCCTTCGA 257411 >seq1616 Length=409602 Score = 87.8 bits (96), Expect = 1e-15 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 |||||| ||| ||||| |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 400451 GAACCCGAAGGCTTTGGTTTCCCTCAAGCTGCCCGCCGAATCATC-TGAACGAACATCGA 400393 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||| |||| |||||||||||||||| | |||| | ||||||||||||| |||||| Sbjct 400392 CGGATCGCTAGCCGGCATAGTTTACGGTAAGAACTAGGGCGGTATCTGATCGCCTTCGA 400334 >seq1512 Length=772936 Score = 87.8 bits (96), Expect = 1e-15 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 |||||| ||| ||||| |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 766242 GAACCCGAAGGCTTTGGTTTCCCTCAAGCTGCCCGCCGAATCATC-TGAACGAACATCGA 766184 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||| |||| |||||||||||||||| | |||| | ||||||||||||| |||||| Sbjct 766183 CGGATCGCTAGCCGGCATAGTTTACGGTAAGAACTAGGGCGGTATCTGATCGCCTTCGA 766125 >seq1448 Length=203205 Score = 87.8 bits (96), Expect = 1e-15 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 |||||| ||| ||||| |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 1077 GAACCCGAAGGCTTTGGTTTCCCTCAAGCTGCCCGCCGAATCATC-TGAACGAACATCGA 1135 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||| |||| |||||||||||||||| | |||| | ||||||||||||| |||||| Sbjct 1136 CGGATCGCTAGCCGGCATAGTTTACGGTAAGAACTAGGGCGGTATCTGATCGCCTTCGA 1194 >seq1415 Length=153668 Score = 87.8 bits (96), Expect = 1e-15 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 |||||| ||| ||||| |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 1078 GAACCCGAAGGCTTTGGTTTCCCTCAAGCTGCCCGCCGAATCATC-TGAACGAACATCGA 1136 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||| |||| |||||||||||||||| | |||| | ||||||||||||| |||||| Sbjct 1137 CGGATCGCTAGCCGGCATAGTTTACGGTAAGAACTAGGGCGGTATCTGATCGCCTTCGA 1195 >seq1111 Length=160291 Score = 87.8 bits (96), Expect = 1e-15 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 |||||| ||| ||||| |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 3474 GAACCCGAAGGCTTTGGTTTCCCTCAAGCTGCCCGCCGAATCATC-TGAACGAACATCGA 3416 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||| |||| |||||||||||||||| | |||| | ||||||||||||| |||||| Sbjct 3415 CGGATCGCTAGCCGGCATAGTTTACGGTAAGAACTAGGGCGGTATCTGATCGCCTTCGA 3357 >seq988 Length=512285 Score = 87.8 bits (96), Expect = 1e-15 Identities = 92/119 (77%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 |||||| ||| ||||| |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 24312 GAACCCGAAGGCTTTGGTTTCCCTCAAGCTGCCCGCCGAATCATC-TGAACGAACATCGA 24370 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||| |||| |||||||||||||||| | |||| | ||||||||||||| |||||| Sbjct 24371 CGGATCGCTAGCCGGCATAGTTTACGGTAAGAACTAGGGCGGTATCTGATCGCCTTCGA 24429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395087980