Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pediculus_20humanus_20corporis_20[refseq_20GCF_5F000006295.1_202007- 04-23] 1,882 sequences; 110,781,312 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1701 149 1e-33 seq1616 149 1e-33 seq1512 149 1e-33 seq1448 149 1e-33 seq1415 149 1e-33 seq1111 149 1e-33 seq988 149 1e-33 >seq1701 Length=264565 Score = 149 bits (164), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA----CCGCC 182 |||||||||||| ||||||| | | |||||||||||||||||||| | ||| ||| Sbjct 257217 GCATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAG 257274 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 | |||||||||| |||| || |||||| | |||||| || ||||||||||||||| Sbjct 257275 GCAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTT 257334 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 257335 GGATCGTCGCAAGACTAACCTAAGCGAAAGCATTTGCCAAGGATGTTTTCCTTAATCA-A 257393 Query 303 GAACGAAAGTT 313 ||||||||||| Sbjct 257394 GAACGAAAGTT 257404 >seq1616 Length=409602 Score = 149 bits (164), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA----CCGCC 182 |||||||||||| ||||||| | | |||||||||||||||||||| | ||| ||| Sbjct 400140 GCATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAG 400197 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 | |||||||||| |||| || |||||| | |||||| || ||||||||||||||| Sbjct 400198 GCAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTT 400257 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 400258 GGATCGTCGCAAGACTAACCTAAGCGAAAGCATTTGCCAAGGATGTTTTCCTTAATCA-A 400316 Query 303 GAACGAAAGTT 313 ||||||||||| Sbjct 400317 GAACGAAAGTT 400327 >seq1512 Length=772936 Score = 149 bits (164), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA----CCGCC 182 |||||||||||| ||||||| | | |||||||||||||||||||| | ||| ||| Sbjct 765931 GCATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAG 765988 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 | |||||||||| |||| || |||||| | |||||| || ||||||||||||||| Sbjct 765989 GCAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTT 766048 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 766049 GGATCGTCGCAAGACTAACCTAAGCGAAAGCATTTGCCAAGGATGTTTTCCTTAATCA-A 766107 Query 303 GAACGAAAGTT 313 ||||||||||| Sbjct 766108 GAACGAAAGTT 766118 >seq1448 Length=203205 Score = 149 bits (164), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 7/191 (4%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA----CCGCC 182 |||||||||||| ||||||| | | |||||||||||||||||||| | ||| ||| Sbjct 1388 GCATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAG 1331 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 | |||||||||| |||| || |||||| | |||||| || ||||||||||||||| Sbjct 1330 GCAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTT 1271 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 1270 GGATCGTCGCAAGACTAACCTAAGCGAAAGCATTTGCCAAGGATGTTTTCCTTAATCA-A 1212 Query 303 GAACGAAAGTT 313 ||||||||||| Sbjct 1211 GAACGAAAGTT 1201 >seq1415 Length=153668 Score = 149 bits (164), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 7/191 (4%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA----CCGCC 182 |||||||||||| ||||||| | | |||||||||||||||||||| | ||| ||| Sbjct 1389 GCATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAG 1332 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 | |||||||||| |||| || |||||| | |||||| || ||||||||||||||| Sbjct 1331 GCAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTT 1272 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 1271 GGATCGTCGCAAGACTAACCTAAGCGAAAGCATTTGCCAAGGATGTTTTCCTTAATCA-A 1213 Query 303 GAACGAAAGTT 313 ||||||||||| Sbjct 1212 GAACGAAAGTT 1202 >seq1111 Length=160291 Score = 149 bits (164), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA----CCGCC 182 |||||||||||| ||||||| | | |||||||||||||||||||| | ||| ||| Sbjct 3163 GCATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAG 3220 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 | |||||||||| |||| || |||||| | |||||| || ||||||||||||||| Sbjct 3221 GCAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTT 3280 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 3281 GGATCGTCGCAAGACTAACCTAAGCGAAAGCATTTGCCAAGGATGTTTTCCTTAATCA-A 3339 Query 303 GAACGAAAGTT 313 ||||||||||| Sbjct 3340 GAACGAAAGTT 3350 >seq988 Length=512285 Score = 149 bits (164), Expect = 1e-33 Identities = 150/191 (79%), Gaps = 7/191 (4%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA----CCGCC 182 |||||||||||| ||||||| | | |||||||||||||||||||| | ||| ||| Sbjct 24623 GCATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAG 24566 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 | |||||||||| |||| || |||||| | |||||| || ||||||||||||||| Sbjct 24565 GCAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTT 24506 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||||||| |||||||| || |||||||||||||| ||||||| Sbjct 24505 GGATCGTCGCAAGACTAACCTAAGCGAAAGCATTTGCCAAGGATGTTTTCCTTAATCA-A 24447 Query 303 GAACGAAAGTT 313 ||||||||||| Sbjct 24446 GAACGAAAGTT 24436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915182775936