Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pediculus_20humanus_20corporis_20[refseq_20GCF_5F000006295.1_202007- 04-23] 1,882 sequences; 110,781,312 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1701 161 2e-37 seq1616 161 2e-37 seq1512 161 2e-37 seq1448 161 2e-37 seq1415 161 2e-37 seq1111 161 2e-37 seq988 161 2e-37 >seq1701 Length=264565 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 257772 CTAGTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 257713 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 257712 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTTGATCTGTC 257656 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 257972 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 257913 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| | |||||||||||||| Sbjct 257912 -CTCAATC-TCGCGCGGCTAGAAGCCGCTTGTCCCTCTAAGAAG 257871 >seq1616 Length=409602 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 400694 CTAGTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 400635 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 400634 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTTGATCTGTC 400578 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 400896 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 400837 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| | |||||||||||||| Sbjct 400836 -CTCAATC-TCGCGCGGCTAGAAGCCGCTTGTCCCTCTAAGAAG 400795 >seq1512 Length=772936 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 766486 CTAGTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 766427 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 766426 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTTGATCTGTC 766370 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766688 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 766629 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| | |||||||||||||| Sbjct 766628 -CTCAATC-TCGCGCGGCTAGAAGCCGCTTGTCCCTCTAAGAAG 766587 >seq1448 Length=203205 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 834 CTAGTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 893 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 894 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTTGATCTGTC 950 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 633 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 692 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| | |||||||||||||| Sbjct 693 -CTCAATC-TCGCGCGGCTAGAAGCCGCTTGTCCCTCTAAGAAG 734 >seq1415 Length=153668 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 835 CTAGTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 894 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 895 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTTGATCTGTC 951 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 634 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 693 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| | |||||||||||||| Sbjct 694 -CTCAATC-TCGCGCGGCTAGAAGCCGCTTGTCCCTCTAAGAAG 735 >seq1111 Length=160291 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 3717 CTAGTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 3658 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 3657 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTTGATCTGTC 3601 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3921 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 3862 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| | |||||||||||||| Sbjct 3861 -CTCAATC-TCGCGCGGCTAGAAGCCGCTTGTCCCTCTAAGAAG 3820 >seq988 Length=512285 Score = 161 bits (178), Expect = 2e-37 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 24069 CTAGTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 24128 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct 24129 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTTGATCTGTC 24185 Score = 122 bits (134), Expect = 1e-25 Identities = 91/104 (88%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23867 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 23926 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| |||||| | |||||||||||||| Sbjct 23927 -CTCAATC-TCGCGCGGCTAGAAGCCGCTTGTCCCTCTAAGAAG 23968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796785472842