Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pediculus_20humanus_20corporis_20[refseq_20GCF_5F000006295.1_202007- 04-23] 1,882 sequences; 110,781,312 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1701 78.8 1e-12 seq1616 78.8 1e-12 seq1512 78.8 1e-12 seq1448 78.8 1e-12 seq1415 78.8 1e-12 seq1111 78.8 1e-12 seq988 78.8 1e-12 >seq1701 Length=264565 Score = 78.8 bits (86), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT-- 124 ||||||||||| ||||||| | | |||||||||||||| ||||| | ||| ||| Sbjct 257218 CATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAGG 257275 Query 125 -AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 |||||| ||| ||| || |||||| | |||||| || | |||||||||||||| Sbjct 257276 CAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTTG 257335 Query 184 GAT 186 ||| Sbjct 257336 GAT 257338 >seq1616 Length=409602 Score = 78.8 bits (86), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT-- 124 ||||||||||| ||||||| | | |||||||||||||| ||||| | ||| ||| Sbjct 400141 CATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAGG 400198 Query 125 -AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 |||||| ||| ||| || |||||| | |||||| || | |||||||||||||| Sbjct 400199 CAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTTG 400258 Query 184 GAT 186 ||| Sbjct 400259 GAT 400261 >seq1512 Length=772936 Score = 78.8 bits (86), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT-- 124 ||||||||||| ||||||| | | |||||||||||||| ||||| | ||| ||| Sbjct 765932 CATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAGG 765989 Query 125 -AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 |||||| ||| ||| || |||||| | |||||| || | |||||||||||||| Sbjct 765990 CAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTTG 766049 Query 184 GAT 186 ||| Sbjct 766050 GAT 766052 >seq1448 Length=203205 Score = 78.8 bits (86), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Minus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT-- 124 ||||||||||| ||||||| | | |||||||||||||| ||||| | ||| ||| Sbjct 1387 CATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAGG 1330 Query 125 -AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 |||||| ||| ||| || |||||| | |||||| || | |||||||||||||| Sbjct 1329 CAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTTG 1270 Query 184 GAT 186 ||| Sbjct 1269 GAT 1267 >seq1415 Length=153668 Score = 78.8 bits (86), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Minus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT-- 124 ||||||||||| ||||||| | | |||||||||||||| ||||| | ||| ||| Sbjct 1388 CATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAGG 1331 Query 125 -AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 |||||| ||| ||| || |||||| | |||||| || | |||||||||||||| Sbjct 1330 CAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTTG 1271 Query 184 GAT 186 ||| Sbjct 1270 GAT 1268 >seq1111 Length=160291 Score = 78.8 bits (86), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT-- 124 ||||||||||| ||||||| | | |||||||||||||| ||||| | ||| ||| Sbjct 3164 CATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAGG 3221 Query 125 -AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 |||||| ||| ||| || |||||| | |||||| || | |||||||||||||| Sbjct 3222 CAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTTG 3281 Query 184 GAT 186 ||| Sbjct 3282 GAT 3284 >seq988 Length=512285 Score = 78.8 bits (86), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Minus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT-- 124 ||||||||||| ||||||| | | |||||||||||||| ||||| | ||| ||| Sbjct 24622 CATGGAATAATGGAATAGGGCCT-CGGTTCTATTTTGTTGGTTT-TCGGAATTTCCGAGG 24565 Query 125 -AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 |||||| ||| ||| || |||||| | |||||| || | |||||||||||||| Sbjct 24564 CAATGATTAATGGGGACAGGCGGGGGCATTAGTATTGCGGCGTTAGAGGTGAAATTCTTG 24505 Query 184 GAT 186 ||| Sbjct 24504 GAT 24502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511990665280