Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pediculus_20humanus_20corporis_20[refseq_20GCF_5F000006295.1_202007- 04-23] 1,882 sequences; 110,781,312 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1701 215 1e-53 seq1616 215 1e-53 seq1512 215 1e-53 seq1448 215 1e-53 seq1415 215 1e-53 seq1111 215 1e-53 seq988 215 1e-53 >seq1701 Length=264565 Score = 215 bits (238), Expect = 1e-53 Identities = 207/261 (79%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 257871 CTTCTTAGAGGGACAAGCGGCTTCTAGCCGCGCGA-GATTGAG-CAATAACAGGTCTGTG 257928 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||||||||||||||||| |||||||||| || ||||| ||| | Sbjct 257929 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGGAATCAACGTGTTTGACG 257988 Query 191 ---CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 ||| ||||| ||||| ||| || | | || || ||||| | ||||| | | Sbjct 257989 AATCCTAGGCCGAGAGGTCCGGGCAACCCGTTGAATTTCCTTCGTGATAGGGATCGGGGC 258048 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || | | | ||| |||||| || |||||||||| ||||| ||| ||||||| Sbjct 258049 TTGCAATTGTTTCCCGTGAACTAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTG 258108 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 258109 ATTACGTCCCTGCCCTTTGTA 258129 >seq1616 Length=409602 Score = 215 bits (238), Expect = 1e-53 Identities = 208/261 (80%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 400795 CTTCTTAGAGGGACAAGCGGCTTCTAGCCGCGCGA-GATTGAG-CAATAACAGGTCTGTG 400852 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 ||||||||||||||||||||||||||||| |||||||||| || ||||| || | | Sbjct 400853 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGGAATCAACGTGTCTGACG 400912 Query 190 A--CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||| ||||| ||||| ||| || | | || || ||||| | ||||| | | Sbjct 400913 AATCCTAGGCCGAGAGGTCCGGGCAACCCGTTGAATTTCCTTCGTGATAGGGATCGGGGC 400972 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || | | | ||| |||||| || |||||||||| ||||| ||| ||||||| Sbjct 400973 TTGCAATTGTTTCCCGTGAACTAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTG 401032 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 401033 ATTACGTCCCTGCCCTTTGTA 401053 >seq1512 Length=772936 Score = 215 bits (238), Expect = 1e-53 Identities = 208/261 (80%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 766587 CTTCTTAGAGGGACAAGCGGCTTCTAGCCGCGCGA-GATTGAG-CAATAACAGGTCTGTG 766644 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 ||||||||||||||||||||||||||||| |||||||||| || ||||| || | | Sbjct 766645 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGGAATCAACGTGTCTGACG 766704 Query 190 A--CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||| ||||| ||||| ||| || | | || || ||||| | ||||| | | Sbjct 766705 AATCCTAGGCCGAGAGGTCCGGGCAACCCGTTGAATTTCCTTCGTGATAGGGATCGGGGC 766764 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || | | | ||| |||||| || |||||||||| ||||| ||| ||||||| Sbjct 766765 TTGCAATTGTTTCCCGTGAACTAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTG 766824 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 766825 ATTACGTCCCTGCCCTTTGTA 766845 >seq1448 Length=203205 Score = 215 bits (238), Expect = 1e-53 Identities = 208/261 (80%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 734 CTTCTTAGAGGGACAAGCGGCTTCTAGCCGCGCGA-GATTGAG-CAATAACAGGTCTGTG 677 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 ||||||||||||||||||||||||||||| |||||||||| || ||||| || | | Sbjct 676 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGGAATCAACGTGTCTGACG 617 Query 190 A--CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||| ||||| ||||| ||| || | | || || ||||| | ||||| | | Sbjct 616 AATCCTAGGCCGAGAGGTCCGGGCAACCCGTTGAATTTCCTTCGTGATAGGGATCGGGGC 557 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || | | | ||| |||||| || |||||||||| ||||| ||| ||||||| Sbjct 556 TTGCAATTGTTTCCCGTGAACTAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTG 497 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 496 ATTACGTCCCTGCCCTTTGTA 476 >seq1415 Length=153668 Score = 215 bits (238), Expect = 1e-53 Identities = 208/261 (80%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 735 CTTCTTAGAGGGACAAGCGGCTTCTAGCCGCGCGA-GATTGAG-CAATAACAGGTCTGTG 678 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 ||||||||||||||||||||||||||||| |||||||||| || ||||| || | | Sbjct 677 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGGAATCAACGTGTCTGACG 618 Query 190 A--CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||| ||||| ||||| ||| || | | || || ||||| | ||||| | | Sbjct 617 AATCCTAGGCCGAGAGGTCCGGGCAACCCGTTGAATTTCCTTCGTGATAGGGATCGGGGC 558 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || | | | ||| |||||| || |||||||||| ||||| ||| ||||||| Sbjct 557 TTGCAATTGTTTCCCGTGAACTAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTG 498 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 497 ATTACGTCCCTGCCCTTTGTA 477 >seq1111 Length=160291 Score = 215 bits (238), Expect = 1e-53 Identities = 208/261 (80%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 3820 CTTCTTAGAGGGACAAGCGGCTTCTAGCCGCGCGA-GATTGAG-CAATAACAGGTCTGTG 3877 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 ||||||||||||||||||||||||||||| |||||||||| || ||||| || | | Sbjct 3878 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGGAATCAACGTGTCTGACG 3937 Query 190 A--CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||| ||||| ||||| ||| || | | || || ||||| | ||||| | | Sbjct 3938 AATCCTAGGCCGAGAGGTCCGGGCAACCCGTTGAATTTCCTTCGTGATAGGGATCGGGGC 3997 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || | | | ||| |||||| || |||||||||| ||||| ||| ||||||| Sbjct 3998 TTGCAATTGTTTCCCGTGAACTAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTG 4057 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 4058 ATTACGTCCCTGCCCTTTGTA 4078 >seq988 Length=512285 Score = 215 bits (238), Expect = 1e-53 Identities = 208/261 (80%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 23968 CTTCTTAGAGGGACAAGCGGCTTCTAGCCGCGCGA-GATTGAG-CAATAACAGGTCTGTG 23911 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 ||||||||||||||||||||||||||||| |||||||||| || ||||| || | | Sbjct 23910 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGGAATCAACGTGTCTGACG 23851 Query 190 A--CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | ||| ||||| ||||| ||| || | | || || ||||| | ||||| | | Sbjct 23850 AATCCTAGGCCGAGAGGTCCGGGCAACCCGTTGAATTTCCTTCGTGATAGGGATCGGGGC 23791 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| || | | | ||| |||||| || |||||||||| ||||| ||| ||||||| Sbjct 23790 TTGCAATTGTTTCCCGTGAACTAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTG 23731 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 23730 ATTACGTCCCTGCCCTTTGTA 23710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947182173696