Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq414447 145 1e-32 >seq414447 Length=4226 Score = 145 bits (160), Expect = 1e-32 Identities = 179/241 (74%), Gaps = 19/241 (8%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||| |||| |||||| ||| || |||| || | |||||||||| ||||||| ||||| Sbjct 2735 CAGTGAAGCGAGCGTGCAGCCAAGGACATATAGGAGCATCACAGATTTGTTATT-CCTCA 2793 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA-------GCCACCAACCA 129 || | | |||| | || | ||||||||||||| | ||| ||| | Sbjct 2794 GTCT-CGTTCGGCTAGGAGATACCTTTCCCTCTAAGAAGAAATTGAATCGCCGGTAACAA 2852 Query 130 TA--GTCGAT---GG-----GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || || | | || | ||| |||| ||| ||| |||||||||||||| |||||| Sbjct 2853 TATTGTGGGTACTGGAAATCGCCTAGTTAGAAGGCTAAAGTCTCGTTCGTTATGGGAATT 2912 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 2913 AACCAAACAAAAAGCTCCACCAACTAAGAACGGCCATGCATCACCACCCATCGAATCAAG 2972 Query 240 A 240 | Sbjct 2973 A 2973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 782728394223