Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Philaenus_20spumarius_20[genbank_20GCA_5F002233535.1_202017-07-25] 1,822,983 sequences; 1,248,087,067 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq802689 190 3e-46 seq961517 172 9e-41 seq392122 138 2e-30 seq564727 109 9e-22 seq913317 73.4 7e-11 >seq802689 Length=464 Score = 190 bits (210), Expect = 3e-46 Identities = 157/189 (83%), Gaps = 8/189 (4%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| ||| ||| ||||||||||| |||| ||||||||||||| Sbjct 188 TACTGAGCAGGATTACTATTACAACGAGTAGTCATCAGTAGAGTAACACTAACCTGTCTC 129 Query 60 A------TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 113 | ||||||||||||||||||||| |||||||||| | | |||||||||| |||| Sbjct 128 ACGACGCTGACGGTCTAAACCCAGCTCAAGTTCCCTATTTGAGC-TGAACAATCCGACGC 70 Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173 || |||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||| Sbjct 69 TTGGCGAATTTTGCTTCGCAATGATAGGAAGAGCCAACATCGAAGGATCAAAAAGCGACG 10 Query 174 TCGCTATGA 182 ||||||||| Sbjct 9 TCGCTATGA 1 >seq961517 Length=4415 Score = 172 bits (190), Expect = 9e-41 Identities = 160/206 (78%), Gaps = 14/206 (7%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| Sbjct 1075 GTCATCAGTAGGGTAAAACTAACCTGTCTCACAATGGTCTAAACCCAGCTCACATTCCCT 1016 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||| |||| |||||||| || ||| | |||||||||| | |||||| Sbjct 1015 ATTATCGGGTAAACAATCCGACTCTTGGCAAATTCTGCTTTGCAATGATA---------- 966 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||| | ||| || ||||| ||| | | || ||||||||||| Sbjct 965 ----CGAAGGATCAAAAACTGATGTCTCTTTGAACACTTAGACCCTACGAGCCAGTTATC 910 Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235 ||| |||||| ||||||| |||||| Sbjct 909 CCTTTGGTAAATTTTCTGAAACCTCT 884 >seq392122 Length=758 Score = 138 bits (152), Expect = 2e-30 Identities = 112/135 (83%), Gaps = 7/135 (5%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCA------TGACGGTCTAAACCCAGCTCACG 83 ||||||| |||||||| |||||||||||||| ||||||||||| ||||| |||| Sbjct 625 GTCATCATTAGGGTAACACTAACCTGTCTCACGACGCTGACGGTCTAACCCCAGGACACG 684 Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 |||| |||| | | |||||||||| |||||| |||||| |||||| |||||||||| Sbjct 685 TTCCGTATTTGCGC-TGAACAATCCGACGCTTGGCGAATTTCGCTTCGCAATGATAGGAA 743 Query 144 GAGCCGACATCGAAG 158 ||||||||||||||| Sbjct 744 GAGCCGACATCGAAG 758 >seq564727 Length=539 Score = 109 bits (120), Expect = 9e-22 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 ||||||||| ||||||||||||||||||||| | ||||||||||| || |||||||||| Sbjct 1 TCAAAAAGCGACGTCGCTATGAACGCTTGGCCGAAACAAGCCAGTTGTCGCTGTGGTAAC 60 Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCA 273 ||||||| ||||| | || ||||| | | | |||||||| | |||||| Sbjct 61 TTTTCTGACACCTATTGCTGAAAATTCTTAAAGCCAAAAGGATCAAAAGGCCA 113 >seq913317 Length=913 Score = 73.4 bits (80), Expect = 7e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 186 CTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||| ||||||| ||||||||||||||||||||||||||| |||||| || Sbjct 837 CTTGGCCGCCACAATCCAGTTATCCCTGTGGTAACTTTTCTGATACCTCTTGC 889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838824433248