Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq27989 123 5e-26 >seq27989 Length=4809 Score = 123 bits (136), Expect = 5e-26 Identities = 188/266 (71%), Gaps = 24/266 (9%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTT---------------GCTC 116 |||||||||| ||||||||||| | ||||||||| ||| || Sbjct 3310 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTAAATTTAATGAAAATTAAAACGCCT 3251 Query 117 GAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG 175 ||||| ||| |||||||||||| ||||| ||| | ||| |||||| ||||||| ||| Sbjct 3250 GAATATATTTTGCATGGAATAATGGAATATGACCTCTGGT-CTATTTGATTGGTTTTTAG 3192 Query 176 GACC---GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGG 232 | | |||||||||||||| ||| ||||| | |||||| | ||||| Sbjct 3191 ATGCCAAGAGGTAATGATTAATAGAAGCAGTTGGGGGCATTAGTATTACGAGGCGAGAGG 3132 Query 233 TGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTC 292 |||||||| | || |||||| ||| |||||||| || |||||||||||||| Sbjct 3131 TGAAATTCGTAGACCCTCGTAAGACTGACTTAAGCGAAAGCATTTGCCAAGGATGTTTTC 3072 Query 293 ATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| ||||||||||||| || Sbjct 3071 ATTAATCA-AGAACGAAAGTTAGAGG 3047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914222328448