Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq27989 147 9e-33 seq23023 80.6 1e-12 >seq27989 Length=4809 Score = 147 bits (162), Expect = 9e-33 Identities = 110/129 (85%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || | ||||||||||||||||||||||||||||| ||| ||||| ||| | Sbjct 273 GAGCATACATGGTAGGACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGG 214 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || ||| |||||| ||||||||||||| |||| | ||||||| Sbjct 213 GAAACCCTGATGGAGGACCGAAGCAGTTCTGACGTGCAAATCGATTGTCAGAATTGGGTA 154 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 153 TAGGGGCGA 145 Score = 118 bits (130), Expect = 4e-24 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| | || |||| |||||| | | ||||| ||||||| Sbjct 976 GAGTCGTGTTGCTTGATAGTGCAGCACAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 917 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||| | ||||||| |||| ||||| ||||||| ||| || | Sbjct 916 ATAACCACGAGACCGATAGAGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAAT 857 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 ||||||||||| || |||||||| Sbjct 856 AGAGAGTTAAAGAGTACGTGAAA 834 >seq23023 Length=253 Score = 80.6 bits (88), Expect = 1e-12 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | |||||| || |||||||||||| || |||| ||||||||||| |||| |||| | Sbjct 177 TTCTAAGAGTCGGGTAGTTTGGGAATGCTGCCCTAATTGGGAGGTAAACTTCTCCTAAGG 236 Query 94 CTAAATATT 102 ||||||||| Sbjct 237 CTAAATATT 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077708582300