Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq27989 167 4e-39 >seq27989 Length=4809 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2699 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 2758 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 2759 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 2798 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 2446 CCTTCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG- 2504 Query 73 CTCAAACTTCCATT--GGCTGGAAGCCAATAGTCCCTCTAAGAAGC 116 ||||| || |||| ||| || || | |||| | |||||||| Sbjct 2505 CTCAATCT--CATTAATGCTAGACGCATTTTGTCCATTTAAGAAGC 2548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795975410106