Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phlebotomus_20papatasi_20[genbank_20GCA_5F000262795.1_202012-05-16] 106,826 sequences; 363,767,980 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq73 125 1e-23 >seq73 Length=410114 Score = 125 bits (138), Expect = 1e-23 Identities = 201/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 162549 TGCTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGC 162608 ||||||| | ||||| || |||||| | |||||| ||||| ||||| || ||| Sbjct 174399 TGCTAAAATGTATGGATTTTGGATCGTTGTGAACTACCGGGAAGCCTATGGAATGTTTGC 174340 Query 162609 CTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACG 162668 || || || || || |||||||| || |||| ||||||| | || ||||| || Sbjct 174339 CTGTAATGGGATCCTCTTCAATCATGAGTCTCCACGTCGAGGAGAAAACTTTGTCACGCG 174280 Query 162669 CAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGA--TCTACAACTT 162726 ||||| |||| | | || || | |||| || || | | | | |||| Sbjct 174279 TAAGATTACCCGATCTGTAGCCAAGATCTCTTTGGG--TCAAATGGAAAATTTTGAACTC 174222 Query 162727 GGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGG 162786 || || ||| || ||||||||||||||||||| || |||||||||||||| || |||||| Sbjct 174221 GGCAATCTCGATTCCCGACGTGACTGGGGACATGCTAAAGACTACGTAGAAGCGATGTGG 174162 Query 162787 TTGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGG 162833 | ||| | |||| || | ||| | ||||| || || |||||||| Sbjct 174161 CTTATGTTGCAGCGTGAAACGCCCCAGGATTACGTAATTGCAACTGG 174115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690535877243760