Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoebis_20sennae_20[genbank_20GCA_5F001586405.1_202016-03-10] 3,484 sequences; 287,490,372 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq209 237 1e-57 seq995 168 5e-37 >seq209 Length=133430 Score = 237 bits (262), Expect = 1e-57 Identities = 1131/1778 (64%), Gaps = 37/1778 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||| || || ||||||||||| | || || | | ||||||||| || || Sbjct 15036 ATCAACTGTGAATTGAATTGCATTAGCAGCTGGTTTTGTGCGTAAATAGTACATTCCTGT 14977 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || || || ||||||||| || || || |||| ||| ||| ||||||| || || Sbjct 14976 TTTCAGTCCCATTTTCCAAGCATAAAAGTGTATTGATGTTAACTTTCCATAATTAGGTTC 14917 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||||| || || || || || || || || ||| | ||| | ||| |||||||| Sbjct 14916 AGCAACATGAATGTTGAAAGATTGGCTTTGGTCAATGAATGCACCCCTATCAGCAGCCAT 14857 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| | | | | | ||||| ||||| || ||||| |||| | | || Sbjct 14856 TTGAATTGTT-GTCTTAACTGATATTTCCCAAACTGTCTTATACAAATCTCTGATTTCTT 14798 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374 | || || | || || | || | |||||| | ||| | || | |||| ||| Sbjct 14797 TAGGTATTGCTTCTATATTTTGAATAGAACCATTGTTGTGTATTA-TAAGATTTTTCATG 14739 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || ||| ||| | | | | || || |||||| |||||| ||||| Sbjct 14738 TCTTCATCCCATAAATCTGCTTGTGTCAAATCCCTAAGCAAGTGGTGATTGACCACTTGA 14679 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || || || | |||||| | ||| ||||| || || | |||||||| |||||| Sbjct 14678 AATTCTCCAGATAATACACGTCTTTGATAAATGTTTGAAGTAAATGGTTCAAATGATTCA 14619 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 | || || |||||||| ||||||||||| || |||||||| || | | |||||||| Sbjct 14618 TTATTACCAAGAATTTGTGCAGTAGATGCCGTGGGCATGGGTGCTAGTAGTAATGAGTTA 14559 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC--ATCGGTTTAT 65612 || | || ||| || |||| || | | | ||||| |||| ||| | | | Sbjct 14558 CGAAGACCATTCTTTGCAATTTTTTCCTTAAGAACAGACCAGTCCCACAAATCTGATGGT 14499 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 || ||| ||||||||| | ||| | |||| |||||| || || Sbjct 14498 -GT-TTTATC------CCACATATCATATTGTAAAATTCCTTGACTGGCTGGACTTCCTT 14447 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 || | || ||||| || | || ||||||| || ||| | || | ||| || Sbjct 14446 CATAAGTGCTATATACTCCATCTTTCTCTGCAAGTTCACTGCTTGCTTCCAAGGCGCCAT 14387 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATT-AAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 | || || || || || || || | || || || | || | || || || || || Sbjct 14386 AGTATATTGTTTCAAATATTTGTTGGTTCAACTTGA-TAGCTTTCTCACTTTCATATGGA 14328 Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 |||| ||| | ||||| |||||||| ||||||||||||||||| || ||||| | ||| Sbjct 14327 ATACGCATTAAAACAAAGGTGTCGGCTAGACCTTGAACTCCAATTCCTATGGGCCTATGC 14268 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 | | ||| || | | || || || || ||||| | |||| ||| || || || Sbjct 14267 CTAAGATTTGAGTTTTTAGCTTCTGGAACTGGGTAAAAGTTGACATCAATTATTTTGTTA 14208 Query 65912 AAATTGCGTGTCACCA-CATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970 | ||| |||| | | || | | | | || | ||| |||| ||| |||| Sbjct 14207 AGATTTTGTGTTATTATTTTGGTCACTTC-TTTTAACTTTTCAAAATTGAAA-GTTT--- 14153 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 ||| | | |||||| || || || | || || | || ||||| Sbjct 14152 --TATCTTCATT---------AACAAACATGTTTAGTGCTATTGAAGCCAAATTACAGAC 14104 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090 || | || || | | || ||||| |||||||| || || ||||| ||||| ||| Sbjct 14103 TGCAACTTCATCTGATGATGTGTACTCTACAATTTCAGTACAGAGATTGCTGCATTTTAT 14044 Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150 ||||| | ||| | |||||| || || | |||||| | ||||| || | ||||||||| Sbjct 14043 TGTGCCAAGATTTTTTTGATTGCTTTTTCTATTGCAGGAGTCCTTATATAACATGTACGG 13984 Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA-AAGAGCGCGTGCCTTCACCG 66209 || || ||||| ||||| | || | || || | ||| || | | | || || | | Sbjct 13983 TGTTCCAGTCTCCACTTGAGCTTCTACAATTGCTTTCCATAACATC-TGCGCTTTTA-CT 13926 Query 66210 TACGTACCGCCCTACCTTT-GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 | | || | || ||| |||| || | ||| || || | ||| || ||| ||| Sbjct 13925 TGCTTAACAAACTTTTTTTCTTGTTCATATTTTTCATATAGCTTTTCAAACTCTTCTCCC 13866 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || || || | || || | || |||||||| | ||||| | | | | Sbjct 13865 CAACAATCTGAAAGGCCAGGGCAATCATGGGGACACATAATACTCCAATTTTCGTTTTTT 13806 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || || | |||||||| ||| |||||||| || || || || | || | ||| || Sbjct 13805 TCAACCCTTTTCATAAATAAATCTGGTATCCAAAGAGCATAAAACAACTCTCTTGCACGG 13746 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 || || | || |||||| | || | ||| ||||| || || ||||||||| Sbjct 13745 ACTTCTTCTTTCCCTGTATTTTTTTTGAGATCTAAGAATTCAAAAATATCTGCATGCCAT 13686 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 ||||||| ||| || || || | || | || ||| ||||| || || || | | Sbjct 13685 GGTTCCAAGTAAATAGCAAATGCACCAGGTCTCTTATTGCCGCCTTGATCTACATATCTA 13626 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 || ||||| | || | ||||| ||||| | || ||||| ||||| || || Sbjct 13625 GCTGTGTTGTTATATACTCTTAACATTGGTACCAATCCATTAGAAACTCCATTTGTTCCA 13566 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 | ||| ||| ||| |||| |||| || |||| ||||| |||||||| || | Sbjct 13565 GCTATGTAGGACCCTTTAGCCCTTATACAATGTACATGTAGACCTATACCACCAGCTGAT 13506 Query 66629 TTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTG 66688 || || || ||||| | | || |||| || ||||| ||| | || Sbjct 13505 TTTGAAATCATTGCACATTGTTTAAGAGTATCATATATTCCTTCAATACTGTCGTCTTTC 13446 Query 66689 ATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTG 66748 || | | | | | || ||| ||| || || | || || || || ||||| || || Sbjct 13445 ATAGCTATTAAGAAACAAGAAGAAAGCTGTGGCCTCGGAGTAGCAGCAGAGAAAAGTGTT 13386 Query 66749 GGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCA 66808 || | || || |||||||| | ||| | | ||||| || | |||| |||||||| Sbjct 13385 GGACTTGCATGTGTAAAGTATTTTTCAGATAACAAGTTGTATGTATTGATGGCAGCATCA 13326 Query 66809 ATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAG 66846 | | ||| ||||| || || | |||| || ||| || Sbjct 13325 ACATCTTCACCATGTATTCCAATTGCAACTCTCATAAG 13288 >seq995 Length=359585 Score = 168 bits (186), Expect = 5e-37 Identities = 149/186 (80%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 61191 ACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAA 61250 |||||| || || |||||| | || |||||||| |||||||| || || ||||||||||| Sbjct 125410 ACATTTTATCAAGCATGTGCTAGCATTCTTTGCTGCTTCGGATGGAATTGTCAATGAGAA 125351 Query 61251 TTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTT 61310 | ||||||||||| | || |||||||| ||| | ||||| || | |||||| || || Sbjct 125350 CCTGGTGGAACGTTTCTCACAAGAGGTGCAGGTGACAGAGGCTCGATTTTTCTATGGTTT 125291 Query 61311 CCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 ||||||||||||||||||||| ||||| ||||||||| | || || || || ||||| Sbjct 125290 CCAGATTGCCATGGAGAATGTACACTCAGAGATGTACTCATTACTTATTGACACATACAT 125231 Query 61371 CAGGGA 61376 ||||| Sbjct 125230 TAGGGA 125225 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 ||||||||||| || || || | || || ||| ||| || ||||||||||| | Sbjct 125045 TTGTTCAATGCAATTGAAACACTTCCCTGTGTAAAGAAGAAGGCAGATTGGGCCTTACAG 124986 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| ||| | ||||| || ||||||||| || | | || || || | || ||| Sbjct 124985 TGGATAGGCAGCAAGACGGCAACCTTTGGTGAAAGAATTATTGCCTTCGCTGCTGTTGAG 124926 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || |||| ||| |||| |||||| | ||||| |||||||| || ||||| || ||| Sbjct 124925 GGAATATTCTTCTCTGGAAGCTTTGCCTCCATCTTCTGGTTGAAAAAGCGTGGTCTGATG 124866 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 || || | |||||||| || ||| |||| || | || |||| Sbjct 124865 CCAGGATTAACCTTCAGTAACGAGCTGATTTCTAGGGATGAGG 124823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397551118765760