Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq131842 262 8e-68 seq47705 87.8 3e-15 seq192360 73.4 8e-11 >seq131842 Length=691 Score = 262 bits (290), Expect = 8e-68 Identities = 254/323 (79%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 10 AGTTATGTTTAGCGGATTTTCTCGGCCGTCTGCTTACCCGCACTATTGGATTGTCCCGAA 69 || || ||||||||| |||||| ||| || || ||||| || ||||| ||| ||| || Sbjct 322 AGATAAGTTTAGCGGGTTTTCTTGGCAGTTTGATTACCTACATTATTG-ATTCTCC--AA 378 Query 70 GGACGTTCCATACTGTCAATCTCGACTCTTTCCGTGGATTTGCCTGCGGAAATCAACGTC 129 ||| || ||||| ||| |||||||||| | |||||||||| | ||||||| || Sbjct 379 GGATCATC-ATACTATCAGGTTCGACTCTTTTGGCGGATTTGCCTACCAAAATCAAAATC 437 Query 130 TACACTCTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGT 189 ||| | ||||||||| ||||||| |||| | ||||||||||||||| || | | Sbjct 438 TACTCCCTTTAACCGAGAATTCCGTATCTCGGCAGTAGTGTCACTCCTGCGTCACCGCAT 497 Query 190 CACCCTCAAATGTAGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCT 249 ||| || ||| ||||||||||||| |||||||||| ||||||| | || || || Sbjct 498 CACTCTGGAATTTAGTAACGGAATATTAACCGTTTCATCCATCGGCTTAACCATTAGGTG 557 Query 250 GAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTT 309 | ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 558 TAGCCTTAGGGCCCGACTTACCCTGATCCGATTAGCGTTGATCAGGAAACCTTAGTCTTT 617 Query 310 CGGCGAGGGGGTTTCCCACCCCC 332 |||||||| |||||| |||| || Sbjct 618 CGGCGAGGAGGTTTCTCACCTCC 640 >seq47705 Length=4283 Score = 87.8 bits (96), Expect = 3e-15 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 146 CTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGT 205 |||||||||||| |||| | | ||| ||| ||| | | |||| | | ||||| Sbjct 3941 CTATTCCGTCAGTTCGCGGTGCTTTCATCACTGTGTCACTCCATCACAATTATTAGTAGT 3882 Query 206 AACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGA 265 | |||||| ||||| || ||||||| || || ||||| || ||||| | ||||| Sbjct 3881 ACGGGAATATTAACCCGTT-GGCCATCGACGTCCCCCTTCGGGTGTGCCTTAGGTCCCGA 3823 Query 266 CTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT-TC 324 || ||||| | | ||||||| | | ||||| |||| ||||| ||||| || | || || Sbjct 3822 CTAACCCTCAGCTGATTAGCATAGCTGAGGAATCCTTGGTCTTACGGCGGGGTGTTTCTC 3763 Query 325 CCACCCC 331 |||||| Sbjct 3762 GCACCCC 3756 >seq192360 Length=5402 Score = 73.4 bits (80), Expect = 8e-11 Identities = 64/80 (80%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 253 CCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGG 312 ||||| | |||||| |||||| |||||||| || ||| ||||||||||| ||||||||| Sbjct 3993 CCTTAGGGGCCGACTCACCCTGCTCCGATTAACGTTGAACAGGAAACCTTGGTCTTTCGG 3934 Query 313 CGAGGGGGTTTCCCACCCCC 332 | ||| || | ||| ||| Sbjct 3933 TGTGGGAGTCTTTCACTCCC 3914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 958152384000