Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19]
192,460 sequences; 549,932,840 total letters
Query= AAMG01000056.1
Length=332
Score E
Sequences producing significant alignments: (Bits) Value
seq131842 262 8e-68
seq47705 87.8 3e-15
seq192360 73.4 8e-11
>seq131842
Length=691
Score = 262 bits (290), Expect = 8e-68
Identities = 254/323 (79%), Gaps = 4/323 (1%)
Strand=Plus/Plus
Query 10 AGTTATGTTTAGCGGATTTTCTCGGCCGTCTGCTTACCCGCACTATTGGATTGTCCCGAA 69
|| || ||||||||| |||||| ||| || || ||||| || ||||| ||| ||| ||
Sbjct 322 AGATAAGTTTAGCGGGTTTTCTTGGCAGTTTGATTACCTACATTATTG-ATTCTCC--AA 378
Query 70 GGACGTTCCATACTGTCAATCTCGACTCTTTCCGTGGATTTGCCTGCGGAAATCAACGTC 129
||| || ||||| ||| |||||||||| | |||||||||| | ||||||| ||
Sbjct 379 GGATCATC-ATACTATCAGGTTCGACTCTTTTGGCGGATTTGCCTACCAAAATCAAAATC 437
Query 130 TACACTCTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGT 189
||| | ||||||||| ||||||| |||| | ||||||||||||||| || | |
Sbjct 438 TACTCCCTTTAACCGAGAATTCCGTATCTCGGCAGTAGTGTCACTCCTGCGTCACCGCAT 497
Query 190 CACCCTCAAATGTAGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCT 249
||| || ||| ||||||||||||| |||||||||| ||||||| | || || ||
Sbjct 498 CACTCTGGAATTTAGTAACGGAATATTAACCGTTTCATCCATCGGCTTAACCATTAGGTG 557
Query 250 GAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTT 309
| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 558 TAGCCTTAGGGCCCGACTTACCCTGATCCGATTAGCGTTGATCAGGAAACCTTAGTCTTT 617
Query 310 CGGCGAGGGGGTTTCCCACCCCC 332
|||||||| |||||| |||| ||
Sbjct 618 CGGCGAGGAGGTTTCTCACCTCC 640
>seq47705
Length=4283
Score = 87.8 bits (96), Expect = 3e-15
Identities = 133/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 146 CTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGT 205
|||||||||||| |||| | | ||| ||| ||| | | |||| | | |||||
Sbjct 3941 CTATTCCGTCAGTTCGCGGTGCTTTCATCACTGTGTCACTCCATCACAATTATTAGTAGT 3882
Query 206 AACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGA 265
| |||||| ||||| || ||||||| || || ||||| || ||||| | |||||
Sbjct 3881 ACGGGAATATTAACCCGTT-GGCCATCGACGTCCCCCTTCGGGTGTGCCTTAGGTCCCGA 3823
Query 266 CTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT-TC 324
|| ||||| | | ||||||| | | ||||| |||| ||||| ||||| || | || ||
Sbjct 3822 CTAACCCTCAGCTGATTAGCATAGCTGAGGAATCCTTGGTCTTACGGCGGGGTGTTTCTC 3763
Query 325 CCACCCC 331
||||||
Sbjct 3762 GCACCCC 3756
>seq192360
Length=5402
Score = 73.4 bits (80), Expect = 8e-11
Identities = 64/80 (80%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 253 CCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGG 312
||||| | |||||| |||||| |||||||| || ||| ||||||||||| |||||||||
Sbjct 3993 CCTTAGGGGCCGACTCACCCTGCTCCGATTAACGTTGAACAGGAAACCTTGGTCTTTCGG 3934
Query 313 CGAGGGGGTTTCCCACCCCC 332
| ||| || | ||| |||
Sbjct 3933 TGTGGGAGTCTTTCACTCCC 3914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 958152384000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |