Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq171748 120 2e-25 seq11402 93.3 2e-17 >seq171748 Length=503 Score = 120 bits (132), Expect = 2e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||||||||| ||||||||||||| ||||||||| ||| ||||| | |||||| | Sbjct 355 GAACCCAAAAACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTATAAGCAACATCCGC 413 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 414 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 471 >seq11402 Length=7298 Score = 93.3 bits (102), Expect = 2e-17 Identities = 93/118 (79%), Gaps = 6/118 (5%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC-C 59 ||||| ||| ||||||||||||| | | ||||| | | || |||||| | | Sbjct 5543 GAACCTAAAAACTTTGATTTCTCACACTGCGCCGACC----CCCCAT-ATAACAAGGGGC 5489 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 5488 CGATTCAGAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTAAGCGTCTTCGA 5431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277897679400