Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq47705 163 3e-38 seq171562 91.5 1e-16 seq192360 77.0 3e-12 >seq47705 Length=4283 Score = 163 bits (180), Expect = 3e-38 Identities = 148/183 (81%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| | || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2462 GGCACATGGGGGATGCCTAGGCTCTCGAAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 2521 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120 || ||| | ||| ||| || |||| |||| |||||||||||||||||| || | Sbjct 2522 CTTGGGGTAAGAGCAAATATCTATAAATCCCAAGATCTCCGAATGGGGCAACCCGGTAGA 2581 Query 121 TTGGAGA---TATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAA 177 | ||| ||| || ||||| || || | ||||||||||||||||||||||||||| Sbjct 2582 -AGAAGATTCTATCACACAACGCAAGTTGTGA-GCGAACGTGGGGAACTGAAACATCTAA 2639 Query 178 GTA 180 ||| Sbjct 2640 GTA 2642 >seq171562 Length=979 Score = 91.5 bits (100), Expect = 1e-16 Identities = 134/186 (72%), Gaps = 13/186 (7%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 || |||||||| ||| | |||||| |||||||||| | |||||||||||| |||| Sbjct 439 GGCGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGGAAGTCTGCGAAAAGCTTCGGG 380 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC----GATATATT 122 || ||||| | | |||||||| |||| ||||||||||| ||||| || ||| Sbjct 379 GAGCTGGCAATCAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCAGCTGACATAAG 320 Query 123 GGAGATA----TATCATAACGC-TAGG---CGTTAGGCGAACGTGGGGAACTGAAACATC 174 || || |||| || | |||| || |||||| ||| ||||||||||||| Sbjct 319 TCAGTTACTCTTATCTGAATACATAGGATAAGTAGAGCGAACCTGGTGAACTGAAACATC 260 Query 175 TAAGTA 180 |||||| Sbjct 259 TAAGTA 254 >seq192360 Length=5402 Score = 77.0 bits (84), Expect = 3e-12 Identities = 90/118 (76%), Gaps = 9/118 (8%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGC-TCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 ||| ||||||||||||| ||| ||| |||| ||||||||||||| || |||||| ||| Sbjct 2446 GCAAACGGTGGATGCCTTGGCATCT-GGAGCCGAAGAAGGACGTAGCAATCTGCGATAAG 2504 Query 61 CTACGGGGATTGGCACATACGAA----TTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| ||| ||| | | ||||||| | | ||||||||||| ||||| Sbjct 2505 CCTCGGGGAGTGG---ATAAGCACACTGTGATCCGAGGGTGTCCGAATGGGGAAACCC 2559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475911027260