Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq192360 459 7e-127 seq47705 253 5e-65 >seq192360 Length=5402 Score = 459 bits (508), Expect = 7e-127 Identities = 348/409 (85%), Gaps = 5/409 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 979 TACCTGAAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 1038 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||| | ||| |||||||| |||| || ||| Sbjct 1039 AAGCGTTAATCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGTTTCTTAAGTTAGATGT 1098 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| ||||||||| |||||||||||||||||| |||| ||||||||||| ||| Sbjct 1099 GAAAGCCCCGGGCTCAACCTGGGAATTGCATTTAATACTGGGTAACTAGAGTGTGGTAGA 1158 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 | | | |||||| | ||||||| ||||||||||||||||| | |||||||||||||| Sbjct 1159 GAGTAGCGGAATTTCTGGTGTAGCGGTGAAATGCGTAGATATCAGAAGGAACACCAATGG 1218 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||| |||||| |||||||||||| | || ||||||| |||||||||||||| Sbjct 1219 CGAAGGCAGCTACCTGGGCCAACACTGACGCTGAGGCGCGAAAGCATGGGGAGCAAACAG 1278 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTA-- 360 |||||||||||||||||||||| || |||||||| ||||| |||| ||||| || Sbjct 1279 GATTAGATACCCTGGTAGTCCATGCTATAAACGATGACAACTTGTTGATGGGGGGCTAAC 1338 Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 |||| ||| |||||||||||| || |||||| ||||||||||| ||| Sbjct 1339 CTTCGTTG---ACGTAGCTAACGTGTTAAGTTGTCCGCCTGGGGAGTAC 1384 >seq47705 Length=4283 Score = 253 bits (280), Expect = 5e-65 Identities = 268/352 (76%), Gaps = 1/352 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| |||||||||||||||||||||||| ||| ||| ||||||| Sbjct 966 GAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA 1025 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||| ||| |||| ||||| ||||| |||||| |||| ||| |||||| Sbjct 1026 TCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGGATATTAAGTCAGCGGTGAAAGTTT 1085 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 |||| ||||| |||||| ||| |||| || |||| | || | || | Sbjct 1086 GAGGCTCAACCTTAAAATTGCCGTTGAAACTGGTATTCTTGAGTATAGATGAAGTAGGCG 1145 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 |||||| ||||||| ||||||||| ||||||| || |||| ||||| ||| ||||| Sbjct 1146 GAATTCGTGGTGTAGCGGTGAAATGCATAGATATCACGAAGAACTCCAATTGCGCAGGCA 1205 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 || || | || ||||||||| | ||||||||||||||| | ||||||||||||||| Sbjct 1206 GCTTACTAAGGTATAACTGACGCTGAGGCACGAAAGCGTGGGTATCAAACAGGATTAGAT 1265 Query 311 ACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGAT-TTAC 361 |||||||||||||||||| ||||| || ||||| |||| | ||| |||| Sbjct 1266 ACCCTGGTAGTCCACGCCGTAAACTATGATTACTAGCTGTTTGTGATATTAC 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1287118035840