Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq192360 158 2e-36 seq131842 122 1e-25 seq47705 93.3 6e-17 >seq192360 Length=5402 Score = 158 bits (174), Expect = 2e-36 Identities = 188/252 (75%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || |||| | || || ||| Sbjct 4491 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCCACTTTC-GTGTTTGCAGA 4433 Query 62 GACCTGTGTTTTTAG-TAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| | |||||||| || || | ||| ||||| || | | |||| | Sbjct 4432 GTCCTGTGTTTTTTGATAAACAGTTGCAGCCACCATTTCACTGCGGCCCTCTCAAGCTTA 4373 Query 121 ACACGT----CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 ||| | |||||| | ||| ||||||||||||||||||| | ||||||| Sbjct 4372 CTGCGTAAAGCATTCACCTAAAAGGGCGTACCTTCTCCCGAAGTTACGGTACAATTTTGC 4313 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 ||| |||||| ||| ||||| | | | |||||||| |||||| || ||||||| |||| Sbjct 4312 CGAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGAATTCTCATCCCGACCACCAGTGT 4253 Query 237 CGGTTTACGGTA 248 ||||| |||| Sbjct 4252 TGGTTTGGGGTA 4241 >seq131842 Length=691 Score = 122 bits (134), Expect = 1e-25 Identities = 172/242 (71%), Gaps = 21/242 (9%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| | ||||| || || | || ||| Sbjct 84 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCTATATACGTCTTATTGCTAA-TTGGCAT 142 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | | ||||||||| |||||||| || | | |||||||||||||||| || ||| Sbjct 143 AGCCATGTGTTTTTGTTAAACAGTTGCCTTCTTCTATTCTCTGCGACCTACATT-GCT-- 199 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 |||| | |||| || |||||||||||| ||| ||||||||| || Sbjct 200 ---------------GCAG--GTACCCTTTATCCCGAAGTTACAGGGTCATTTTGCCTAA 242 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||||||| |||| ||| ||||||||||| ||| ||| || || |||||| || Sbjct 243 TTCCTTAACCGTGAATCACTCGAGCGCCTTAGTATACTCAACCCAACTACGTGTGTCCGT 302 Query 241 TT 242 || Sbjct 303 TT 304 >seq47705 Length=4283 Score = 93.3 bits (102), Expect = 6e-17 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||| || ||||||||||||||| || | |||||||| | ||||||| ||| ||| | Sbjct 4194 TGGCGACCTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAGTTCCTTAGCCATGATTCGC 4135 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 ||| ||||| || || |||| | || ||||||||||||||||| ||| Sbjct 4134 TCGAGCGCCTGAGGATACTCTCCTCGATCACCTGTGTCGGTTTACAGTA 4086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693105321580