Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq131842 215 5e-54 seq47705 123 3e-26 >seq131842 Length=691 Score = 215 bits (238), Expect = 5e-54 Identities = 153/173 (88%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 ||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||| Sbjct 304 AAACGGACACACGTAGTTGGGTTGAGTATACTAAGGCGCTCGAGTGATTCACGGTTAAGG 245 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 || |||||||| ||||||||||||||||||||||||||| ||| ||| ||| | ||| Sbjct 244 AATTAGGCAAAATGACCCTGTAACTTCGGGATAAAGGGTACCT--GCAGCAAT-GTAGGT 188 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAAT 197 |||||||||||| |||||||||||||||||||||||| |||| ||||||| Sbjct 187 CGCAGAGAATAGAAGAAGGCAACTGTTTAACAAAAACACATGGCTATGCCAAT 135 >seq47705 Length=4283 Score = 123 bits (136), Expect = 3e-26 Identities = 132/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||| | || ||| || ||||||| ||| |||||| || ||||| Sbjct 4092 AAACCGACACAGGTGATCGAGGAGAGTATCCTCAGGCGCTCGAGCGAATCATGGCTAAGG 4151 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 ||||||||||| | ||||||||||||||| ||| |||| | | | | | || | | Sbjct 4152 AACTAGGCAAAATAGACCTGTAACTTCGGGAGAAA-GGTCGCCAACAAAAGCTGTCA-GC 4209 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| || ||| |||||| |||||||| |||||||||||| || ||| || Sbjct 4210 CGCAGTAAAAAGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCTAA 4261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530209600840