Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq192360 457 2e-126 seq58108 354 2e-95 seq131842 141 2e-31 >seq192360 Length=5402 Score = 457 bits (506), Expect = 2e-126 Identities = 362/429 (84%), Gaps = 4/429 (1%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAG 59 ||||| || | |||||||||| | | ||||||||||| ||| ||| ||| ||||||| Sbjct 4686 CGCGGGTAATCGGCATCTTCACCGATACTTCAATTTCACCGAG-CTCACGGTTGAGACAG 4628 Query 60 CGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTAC 119 ||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4627 TAAGAAGATCATTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTAC 4568 Query 120 CTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT 179 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 4567 CTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCGTT 4508 Query 180 A-GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 4507 ACGCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCCAC 4448 Query 239 TTTCGTGTTTGCAGAGTGCTGTG-TTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCG 297 ||||||||||||||||| ||||| ||||| ||||||||| ||||| || | || || Sbjct 4447 TTTCGTGTTTGCAGAGTCCTGTGTTTTTTGATAAACAGTTGCAGCCACCATTTCACTGCG 4388 Query 298 ACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357 || | ||||||| | | || | |||||| | |||| |||||||||||||||| Sbjct 4387 GCCCTCTCAAGCTTACTGCGTAAAGCATTCACCTAAAAGGGCGTACCTTCTCCCGAAGTT 4328 Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||||| | |||||| Sbjct 4327 ACGGTACAATTTTGCCGAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGAATTCTCAT 4268 Query 418 CCCAACCAC 426 ||| ||||| Sbjct 4267 CCCGACCAC 4259 >seq58108 Length=1450 Score = 354 bits (392), Expect = 2e-95 Identities = 222/238 (93%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 CGCGGGTACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 179 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 178 CTGGCCATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 119 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| || Sbjct 118 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCCTTG 59 Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCC 236 ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 58 CGGCTGACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCC 1 >seq131842 Length=691 Score = 141 bits (156), Expect = 2e-31 Identities = 220/316 (70%), Gaps = 24/316 (8%) Strand=Plus/Plus Query 111 TTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAG 170 ||||||||||||||||||||||| |||||||||||||||||| |||||||| || | || Sbjct 1 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAAG 60 Query 171 CTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTAT 230 |||| | | | | || | | |||||||||| |||||||||||| |||| | ||| Sbjct 61 CTTCTCTTGCGATGACTTCTCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCTATAT 120 Query 231 ACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 ||||| || | || ||| || ||||||||| |||||||| || || | Sbjct 121 ACGTCTTATTGCTAATTGGCATAGCCATGTGTTTTTGTTAAACAGTTGCCTTCTTCTATT 180 Query 291 ATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCC 350 ||| ||||| ||| ||| ||| || ||||| || ||| Sbjct 181 CTCTGCGACCTACAT-TGCT------GCAGGT-----ACCCT------------TTATCC 216 Query 351 CGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTA 410 ||||||||| | | | ||||||||| |||||| || || ||| |||||||| ||| Sbjct 217 CGAAGTTACAGGGTCATTTTGCCTAATTCCTTAACCGTGAATCACTCGAGCGCCTTAGTA 276 Query 411 TTCTCTACCCAACCAC 426 | ||| ||||||| || Sbjct 277 TACTCAACCCAACTAC 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258373464320