Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19]
192,460 sequences; 549,932,840 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq192360 457 2e-126
seq58108 354 2e-95
seq131842 141 2e-31
>seq192360
Length=5402
Score = 457 bits (506), Expect = 2e-126
Identities = 362/429 (84%), Gaps = 4/429 (1%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAG 59
||||| || | |||||||||| | | ||||||||||| ||| ||| ||| |||||||
Sbjct 4686 CGCGGGTAATCGGCATCTTCACCGATACTTCAATTTCACCGAG-CTCACGGTTGAGACAG 4628
Query 60 CGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTAC 119
||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4627 TAAGAAGATCATTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTAC 4568
Query 120 CTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT 179
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 4567 CTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCGTT 4508
Query 180 A-GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 4507 ACGCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCCAC 4448
Query 239 TTTCGTGTTTGCAGAGTGCTGTG-TTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCG 297
||||||||||||||||| ||||| ||||| ||||||||| ||||| || | || ||
Sbjct 4447 TTTCGTGTTTGCAGAGTCCTGTGTTTTTTGATAAACAGTTGCAGCCACCATTTCACTGCG 4388
Query 298 ACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357
|| | ||||||| | | || | |||||| | |||| ||||||||||||||||
Sbjct 4387 GCCCTCTCAAGCTTACTGCGTAAAGCATTCACCTAAAAGGGCGTACCTTCTCCCGAAGTT 4328
Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417
||||| | ||||||| ||||||||| |||||||||||||||||||||| | ||||||
Sbjct 4327 ACGGTACAATTTTGCCGAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGAATTCTCAT 4268
Query 418 CCCAACCAC 426
||| |||||
Sbjct 4267 CCCGACCAC 4259
>seq58108
Length=1450
Score = 354 bits (392), Expect = 2e-95
Identities = 222/238 (93%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 CGCGGGTACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 179
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
|||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 178 CTGGCCATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 119
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 118 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCCTTG 59
Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCC 236
||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 58 CGGCTGACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCC 1
>seq131842
Length=691
Score = 141 bits (156), Expect = 2e-31
Identities = 220/316 (70%), Gaps = 24/316 (8%)
Strand=Plus/Plus
Query 111 TTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAG 170
||||||||||||||||||||||| |||||||||||||||||| |||||||| || | ||
Sbjct 1 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAAG 60
Query 171 CTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTAT 230
|||| | | | | || | | |||||||||| |||||||||||| |||| | |||
Sbjct 61 CTTCTCTTGCGATGACTTCTCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCTATAT 120
Query 231 ACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290
||||| || | || ||| || ||||||||| |||||||| || || |
Sbjct 121 ACGTCTTATTGCTAATTGGCATAGCCATGTGTTTTTGTTAAACAGTTGCCTTCTTCTATT 180
Query 291 ATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCC 350
||| ||||| ||| ||| ||| || ||||| || |||
Sbjct 181 CTCTGCGACCTACAT-TGCT------GCAGGT-----ACCCT------------TTATCC 216
Query 351 CGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTA 410
||||||||| | | | ||||||||| |||||| || || ||| |||||||| |||
Sbjct 217 CGAAGTTACAGGGTCATTTTGCCTAATTCCTTAACCGTGAATCACTCGAGCGCCTTAGTA 276
Query 411 TTCTCTACCCAACCAC 426
| ||| ||||||| ||
Sbjct 277 TACTCAACCCAACTAC 292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1258373464320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |