Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq192360 262 8e-68 seq58108 237 3e-60 seq131842 228 2e-57 seq47705 105 1e-20 >seq192360 Length=5402 Score = 262 bits (290), Expect = 8e-68 Identities = 291/387 (75%), Gaps = 27/387 (7%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | | ||||||||||||| | ||||||||||| | ||| Sbjct 4676 CGGCATCTTCACCGATACTTCAATTTCACCGAGCTCACGGTTGAGACAGTAAGAAGATCA 4617 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4616 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 4557 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGCTCTAACAGA 183 |||||||||||||||||||||||||||||| | | |||||| || | ||||| Sbjct 4556 TATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCGTTACGCTAACCCC 4497 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 | ||||||||||||||||||||||||||||| ||||||| || ||| || || | Sbjct 4496 ATCAATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCCACTTTCGTGTTTG 4437 Query 244 CAGAAACCTGTG-TTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGG-CCTGTCA-- 299 |||| |||||| |||||| |||||||| || || ||| |||||| ||| ||| Sbjct 4436 CAGAGTCCTGTGTTTTTTGATAAACAGTTGCAGCCACCATTTCACTGCGGCCCTCTCAAG 4377 Query 300 ---------TAGA-CAGGCACC------------CCTTCTCCCTAAGTTACGGGGTCATT 337 || | || |||| ||||||||| ||||||||| ||| Sbjct 4376 CTTACTGCGTAAAGCATTCACCTAAAAGGGCGTACCTTCTCCCGAAGTTACGGTACAATT 4317 Query 338 TTGCCGAGTTCCTTAACAATAGTTCTC 364 |||||||||||||| || ||||||| Sbjct 4316 TTGCCGAGTTCCTTCACCCGAGTTCTC 4290 >seq58108 Length=1450 Score = 237 bits (262), Expect = 3e-60 Identities = 195/233 (84%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58 ||| | |||||||||| | |||| ||||||||| |||||| || ||||||| || || Sbjct 232 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCC 173 Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 | || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172 A--TCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 115 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGC-TC 176 |||||||||||||||||||||||||||||||||||| | | |||||| |||| | Sbjct 114 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCCTTGCGGC 55 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATC 229 | || | ||||||||||||||||||||||||||||| ||||||| || Sbjct 54 TGACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTC 2 >seq131842 Length=691 Score = 228 bits (252), Expect = 2e-57 Identities = 203/252 (81%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 105 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTG 164 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct 1 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAAG 60 Query 165 CTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTAT 224 |||| |||| | || ||| |||||||||||||||||||||||| ||||| ||| Sbjct 61 CTTCTCTTGCGATGACTTCTCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCTATAT 120 Query 225 ACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATT 284 || || | |||| | || ||| | | |||||||||| |||||||| || | ||||| Sbjct 121 ACGTCTTATTGCTAATTGGCATAGCCATGTGTTTTTGTTAAACAGTTGCCTTCTTCTATT 180 Query 285 CTCTGCGGCCTGTCATAG--ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCC 342 ||||||| ||| ||| | |||| |||| || |||| ||||||| ||||||||||||| Sbjct 181 CTCTGCGACCT-ACATTGCTGCAGGTACCCTTTATCCCGAAGTTACAGGGTCATTTTGCC 239 Query 343 GAGTTCCTTAAC 354 | ||||||||| Sbjct 240 TAATTCCTTAAC 251 >seq47705 Length=4283 Score = 105 bits (116), Expect = 1e-20 Identities = 106/136 (78%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 220 CCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGC 279 ||||||| || |||||| | |||||||| |||||||||||| ||||||||||| ||||| Sbjct 4281 CCTATACGTCATCTTGCTATTTAGCAGAGTCCTGTGTTTTTGATAAACAGTCGCCTGGGC 4222 Query 280 CTATTCTCTGCGGCCTGTCA---TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCAT 336 || || |||||| ||| || | ||| || ||||||| ||||||| || || Sbjct 4221 CTTTTTACTGCGG-CTGACAGCTTTTGTTGGCGACCTTTCTCCCGAAGTTACAGGTCTAT 4163 Query 337 TTTGCCGAGTTCCTTA 352 |||||| ||||||||| Sbjct 4162 TTTGCCTAGTTCCTTA 4147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1060355304960