Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq192360 529 5e-148 seq47705 179 1e-42 >seq192360 Length=5402 Score = 529 bits (586), Expect = 5e-148 Identities = 422/501 (84%), Gaps = 9/501 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1382 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1441 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||||||||||||||||| |||||||||| | || | || Sbjct 1442 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGTCTTGACATCTACAGAACTTTC 1501 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||| || ||| |||||||| || | |||||||| ||||||| ||||||| Sbjct 1502 CAGAGATGGATTGGTG---CCTTCGGGA-ACTGTAAGACAGGTGCTGCATGGCTGTCGTC 1557 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| ||| || |||||||||||||||||||||||||||||||||| |||||| Sbjct 1558 AGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTTAGTT 1617 Query 239 GCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 |||| || ||| | |||| |||||||| |||||||||||| |||||||||||||||| Sbjct 1618 GCCAGCACGTAATGGTGGGAACTCTAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGA 1677 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1678 GGATGACGTCAAGTCATCATGCCCCTTATGACCAGGGCTACACACGTGCTACAATGGCCG 1737 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 |||||||||| || | |||| ||||| ||| ||||||| |||| | || |||||||| Sbjct 1738 GTACAAAGGGCTGCAATACCGTGAGGTGGAGCGAATCCCAAAAAGCCGGTCCCAGTTCGG 1797 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-AT 475 |||| |||||||||||||| |||||| ||| ||||||||||||| |||||||| | Sbjct 1798 ATTGAGGTCTGCAACTCGACCTCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAAC 1857 Query 476 GCTACGGTGAATACGTTCCCG 496 ||| ||||||||||||||||| Sbjct 1858 GCTGCGGTGAATACGTTCCCG 1878 >seq47705 Length=4283 Score = 179 bits (198), Expect = 1e-42 Identities = 208/277 (75%), Gaps = 9/277 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| | |||| | |||||||||||||||||||||||| ||||||||||||| ||| ||| Sbjct 1361 TACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACAT 1420 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT-CCTCTGACCCCT 119 |||||||||||||| | |||||| |||||||||| ||||| || |||||| | Sbjct 1421 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAAATGTATCTGACGAAT 1480 Query 120 CTAGAGATAGAGGTT-TCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 || || | ||| || | | | | |||| ||||| ||||||||||||||| Sbjct 1481 CTGGAAACAGATTTTCTAGCAATAG-----CAGATATGTAGGTGCTGCATGGTTGTCGTC 1535 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| ||| || |||||| || |||||||||||||| | |||||| Sbjct 1536 AGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCACATTGTTAGTT 1595 Query 239 GCCATC--ATTAAGTTGGGCACTCTAAGTTGACTGCC 273 | | | || ||| || | ||||| | ||||||| Sbjct 1596 ACTAACAGATCAAGCTGAGGACTCTGACAAGACTGCC 1632 Score = 136 bits (150), Expect = 1e-29 Identities = 132/167 (79%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 331 GGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAA 390 |||| ||||||||| ||||||||| ||||||||| || | | || | |||| Sbjct 1717 GGGCGACACACGTGTTACAATGGATGGTACAAAGGGTTGCTACTAGGTGACTAGATGCAA 1776 Query 391 ATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGA 450 ||| || |||| ||| |||||||||||| |||||||||||||||| ||||||||||| Sbjct 1777 ATCTCA-AAAGCCATTCCCAGTTCGGATTGGAGTCTGCAACTCGACTCCATGAAGCTGGA 1835 Query 451 ATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAATACGTTCCCG 496 ||||||||||||| ||||| |||| ||||||||||||||||| Sbjct 1836 TTCGCTAGTAATCGCGCATCAGCCATGGCGCGGTGAATACGTTCCCG 1882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1501105401600