Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq58108 208 1e-51 seq192360 170 4e-40 >seq58108 Length=1450 Score = 208 bits (230), Expect = 1e-51 Identities = 238/314 (76%), Gaps = 8/314 (3%) Strand=Plus/Plus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAAC 88 |||||||| | || |||||| ||| |||| |||| ||| |||| || ||||||| Sbjct 332 ACGCCAGTCTGCATGGAGCCATCCTTGAAATACCACCC-TGTAATATTTGAAATTCTAAC 390 Query 89 CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCG 148 | | | | || | | |||||| ||| | ||| |||||||||||||||||| Sbjct 391 CT-AGGTCCATTATCTGGATCGGGGACATTGTATGGTGGGTAGTTTGACTGGGGCGGTCT 449 Query 149 CCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGC 208 ||||| ||||||||||||||| | | ||| |||||||||| || ||||| | |||| Sbjct 450 CCTCCGAAAGAGTAACGGAGGAGTACGAAGGTACCCTCAGCGCGGTCGGAAATC--GCGC 507 Query 209 AC---AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGA 265 |||||||| ||| ||||||| |||||||||| || |||||| |||||| |||| Sbjct 508 TTTTGAGTGCAAAAGCATAAGGGTGCTTGACTGCGAGACAGACAAGTCGAGCAGGTACGA 567 Query 266 AAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 |||| || |||| |||||||| ||| ||| |||||| |||| |||||| ||||||||||| Sbjct 568 AAGTAGGTCTTAGTGATCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGATAAAAG 627 Query 326 CTACCCTGGGGATA 339 ||| | ||||||| Sbjct 628 GTACTCCGGGGATA 641 >seq192360 Length=5402 Score = 170 bits (188), Expect = 4e-40 Identities = 176/229 (77%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| ||||||||||||| |||||||||| |||||||||||||||| Sbjct 4851 GGACACTGTATGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCT 4910 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | |||| | ||||| | ||| |||| | |||| |||| || |||| ||| | | Sbjct 4911 TCTAAAGGTGTGCTCAGGACGATTGGTAACCGTTCGCAGAGTGTAATGGCATAAGCGCGC 4970 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG-T 290 ||||||| || |||| |||||| | |||| | |||| | | || || |||||||| || | Sbjct 4971 TTGACTGAGAGACCCACAAGTCGATCAGGTAGGAAACTAGAGCATAGTGATCCGGTGGTT 5030 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||||| |||| |||||| | ||||||||| ||| | ||||||| Sbjct 5031 TCAGAATGGAATGGCCATCGCTCAAAGGATAAAAGGTACTCCGGGGATA 5079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980509272960