Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq192360 356 5e-96 seq47705 178 3e-42 >seq192360 Length=5402 Score = 356 bits (394), Expect = 5e-96 Identities = 281/334 (84%), Gaps = 2/334 (1%) Strand=Plus/Minus Query 3 TTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCAT 62 |||||| |||||| ||||||| | | |||||||||||| ||| |||||||||||||||| Sbjct 923 TTACAACCCGAAGGCCTTCTTCCTC-CACGCGGCATTG-CTGCGTCAGGCTTTCGCCCAT 866 Query 63 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 122 || || |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 865 TGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 806 Query 123 TGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACC 182 || |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| ||||||| Sbjct 805 TGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACC 746 Query 183 AACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTC 242 |||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct 745 AACTAGCTAATCTTGCATAGGCTCATCTTTTAGCGCAAGGTCCGAAGGTCCCCTGCTTTA 686 Query 243 TCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGC 302 |||||| | || |||||||||| | |||| |||||||| |||| |||| Sbjct 685 AACCGTAGTCCACATCCGGTATTAGCCACTCTTTCGAGTAGTTATCCCAAACTATAAGGC 626 Query 303 AGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 ||||||||| | |||||||||||||||||| ||| Sbjct 625 AGATTCCTATGTATTACTCACCCGTCCGCCACTC 592 >seq47705 Length=4283 Score = 178 bits (196), Expect = 3e-42 Identities = 139/165 (84%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| | |||||||| |||| ||| || |||||| |||||||||| |||||||||||| Sbjct 883 CACGCGAC-TTGGCTGGTTCAGACTTGCGTCCATTGACCAATATTCCTCACTGCTGCCTC 825 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| ||| | |||||||| | | Sbjct 824 CCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATAAACCTCTCAGTTCCCCT 765 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 | ||||| |||||||| |||| ||||||||||||||||||||| Sbjct 764 ATTCATCGTTGCCTTGGTAAGCCGTTACCTCACCAACTAGCTAAT 720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1069936828800