Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq47705 271 3e-70 seq192360 268 3e-69 >seq47705 Length=4283 Score = 271 bits (300), Expect = 3e-70 Identities = 347/473 (73%), Gaps = 24/473 (5%) Strand=Plus/Minus Query 133 CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTT 192 ||| |||||||||||||||||||||||||| || ||||||| | |||||||||| ||||| Sbjct 3317 CGAGGCTGCACCTAAATGCATTTCGGGGAGTACGAGCTATCTCCAAGTTTGATTAGCCTT 3258 Query 193 TCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC-CTAAGTGGGTTCGGTCCTCCAC 251 ||||||||| || || ||||||| |||||||| || | ||| |||||||||| Sbjct 3257 TCACCCCTACCCTCAAGTCATCCGAAAGCTTTTCAACGCTTA-CCGGTGCGGTCCTCCAA 3199 Query 252 GCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATC 311 | ||| |||||| ||||||||||| || || |||||||||| | |||| |||| | Sbjct 3198 GTGGTGTTACCCAATCTTCAACCTGCTCAAGGGTAGATCACTTGGTTTCGCGTCTACTCC 3139 Query 312 GTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC-----ACGGG 366 ||| | |||||| || |||| ||||||||| ||| | || || | Sbjct 3138 CATTGACTAAAGCGCCCTGTTAAGACTTGCTTTCGCTTCGGAT-CCATACTTATTAGTAA 3080 Query 367 TTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426 ||| ||| || | | | |||||| ||| ||||| | |||||||||||||||||| | Sbjct 3079 TTATCCTTGCCA-ATGAGAGTAACTCGTAGGTTCATTATGCAAAAGGCACGCCGTCACAT 3021 Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTT 486 || || |||||||| | ||||||||||||||||||||| |||||| Sbjct 3020 --TA------------TTATGCTCCGACCGCTTGTAGGCACATGGTTTCAGGGTCTATTT 2975 Query 487 CACTCC-CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCA 545 |||||| | | ||| ||||||||||||||||||||||||| || | ||||||||| Sbjct 2974 CACTCCTCTATTTGAGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCT 2915 Query 546 CCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 | |||||||||| |||| || ||||||| |||||| || ||||| Sbjct 2914 CTCGTGAGTATTTAGCCTTACGGGATGGTCCCCGTCGATTCATACAGGATTTC 2862 >seq192360 Length=5402 Score = 268 bits (296), Expect = 3e-69 Identities = 203/239 (85%), Gaps = 9/239 (4%) Strand=Plus/Minus Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 ||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||| Sbjct 3132 ACACGGGTTAACCTCGCCACGTATCGCTAACTCGCAGGCTCATTCTTCAAAAGGCACGCT 3073 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 |||||| |||| | | | ||||| |||| ||||| ||| | |||||||||| Sbjct 3072 GTCACC-----CCTACTAAGGAG----GCTCCAACGGTTTGTAAGCAAACGGTTTCAGGT 3022 Query 480 ACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTAT 539 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 3021 ACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTAT 2962 Query 540 CGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 |||||| | |||||||||||||||| | |||||||| | |||||||||||| ||||| Sbjct 2961 CGGTCATCTGGGAGTATTTAGGCTTATCAGGTGGTCCTGACAGATTCACACGGGATTTC 2903 Score = 187 bits (206), Expect = 9e-45 Identities = 237/319 (74%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 45 CACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCAT 103 ||||| | || |||||||||||| | | |||||| | | | |||||||| | | Sbjct 3565 CACTTTCTGGTATTCGGAGTTTGCATCGGGTTGGTAAGTCGGGATGACCCCCTAGCCGAA 3506 Query 104 CCAGTGCTCTACCTCCGGGAA-GAA--ACACGCGACGCTGCACCTAAATGCATTTCGGGG 160 |||||||||||| |||| | ||| ||| | | |||| |||||||| |||||||| Sbjct 3505 ACAGTGCTCTACCCCCGGAAGTGAATTACATGAGGCGCT--ACCTAAATAGCTTTCGGGG 3448 Query 161 AGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCA 220 ||||||||||||| | ||| |||||| ||||||||| || |||||||| |||||||| Sbjct 3447 AGAACCAGCTATCTCCAAGCTTGATTAGCCTTTCACTCCGATCCACAGCTCATCCCCATC 3388 Query 221 GTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCA 280 || |||| | |||||||||| ||||| | || ||||| |||| |||| ||| Sbjct 3387 TATTGCAACAGATGTGGGTTCGGCCCTCCGGTCAGTGTTACCTAACTTTCAGCCTGGCCA 3328 Query 281 TGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTA-TTCGGACTC 339 |||||||||| ||| | ||||||||| | | ||| ||| |||||||| || ||||| Sbjct 3327 TGGATAGATCGCTTGGTTTCGGGTCTATACCCTGCGACT-TGACGCCCTATTTAAGACTC 3269 Query 340 GCTTTCGCTACGGCTACCC 358 | |||| ||| | || ||| Sbjct 3268 GGTTTCCCTATGCCTCCCC 3250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1814101847040