Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19]
192,460 sequences; 549,932,840 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq47705 239 1e-60
seq192360 170 5e-40
seq171562 104 6e-20
>seq47705
Length=4283
Score = 239 bits (264), Expect = 1e-60
Identities = 297/395 (75%), Gaps = 15/395 (4%)
Strand=Plus/Minus
Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89
||||||||| | |||| |||||||||| | || ||||||||| ||| |||||||| |
Sbjct 3228 TTTTCAACGCTTACCGGTGCGGTCCTCCAAGTGGT-GTTACCCAATCTT-CAACCTGCTC 3171
Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGA 148
| ||| |||||| | ||||| || ||||| | |||| ||||| | |||||| |||||
Sbjct 3170 A-AGGGTAGATCACTTGGTTT-CGCGTCTACT-CCCATTGACTAAAGCGCCCTGTTAAGA 3114
Query 149 CTCGCTTTTCGCTACGCCTCC---CCTATTCGGT-TAAGCTTTGCCACTGAAAATAAGTC 204
|| ||||| |||| || ||| | |||| | | | | |||||| ||| | ||| ||
Sbjct 3113 CTTGCTTT-CGCTTCGGATCCATACTTATTAGTAATTATCCTTGCCAATGAGAGTAACTC 3055
Query 205 GCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTA 264
| | |||||| ||||||| |||| ||||| | | | |||| || |||||||
Sbjct 3054 GTAGGTTCATTATGCAAAAGGCACGCCGTCACATTATTATG----CTCCGACCGCTTGTA 2999
Query 265 CGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTC 324
||| | ||||||||| ||||||||||||| || | | |||||||||| ||||||||||
Sbjct 2998 GGCACATGGTTTCAGGGTCTATTTCACTCCTCTATTTGAGGTTCTTTTCACCTTTCCCTC 2939
Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384
|||||||| |||||||||||||| || ||||||||||||| |||||||||||
Sbjct 2938 ACGGTACTGGTTCACTATCGGTCTCTCGTGAGTATTTAGCCTTACGGGATGGTCCCCGTC 2879
Query 385 TATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||| ||| ||||||||| ||| ||||||
Sbjct 2878 GATTCATACAGGATTTCTCGTGTCCCGCACTACTC 2844
>seq192360
Length=5402
Score = 170 bits (188), Expect = 5e-40
Identities = 172/221 (78%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCA-ACAAAGTGGGCTCCCACT 257
||| |||| | | |||| | ||||||| |||| ||||||| || ||| |||||| ||
Sbjct 3105 TAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCTACTAAGGAGGCTCCAACG 3046
Query 258 GCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCT 317
| ||||| ||| ||||||||||| |||||||||||||||| ||||||| |||||| |||
Sbjct 3045 GTTTGTAAGCAAACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCT 2987
Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377
||||||||||||||| || | |||||||||| | ||||||||| ||| | ||||
Sbjct 2986 TTCCCTCACGGTACTTGTCCGCTATCGGTCATCTGGGAGTATTTAGGCTTATCAGGTGGT 2927
Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
|| || ||||| || ||||||| || |||| |||||
Sbjct 2926 CCTGACAGATTCACACGGGATTTCTCGGGCCCCGTGCTACT 2886
Score = 125 bits (138), Expect = 2e-26
Identities = 136/170 (80%), Gaps = 9/170 (5%)
Strand=Plus/Minus
Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62
|||||||||||| |||| | | | || || |||| | || ||||||| ||||| || |
Sbjct 3411 TCCGATCCACAGCTCAT--CCCCATCTATTGCAACAGATGTGGGTTCGGCCCTCCGGTCA 3354
Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122
|| |||||| || |||||| |||| |||| ||||||||||| || ||||||||||| |
Sbjct 3353 GT-GTTACCTAA-CTTTCAGCCTGGCCAT-GGATAGATCGCTTGG-TTTCGGGTCTA-TA 3299
Query 123 CCCAGCGACTAGACGCCCTA-GTAAGACTCGCTTTTCGCTACGCCTCCCC 171
||| |||||| ||||||||| ||||||||| |||| ||| ||||||||
Sbjct 3298 CCCTGCGACTTGACGCCCTATTTAAGACTCG-GTTTCCCTATGCCTCCCC 3250
>seq171562
Length=979
Score = 104 bits (114), Expect = 6e-20
Identities = 74/85 (87%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 334 GTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGAC 393
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct 3 GTTCACTATCGGTCGATTACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGAC 62
Query 394 AAAGTTTCTCGTGCTCCGTCCTACT 418
| ||||||||| ||| ||||||
Sbjct 63 AGGATTTCTCGTGTCCCGCCCTACT 87
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1239210416640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |