Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq11402 102 5e-20 seq192427 73.4 2e-11 seq179915 73.4 2e-11 seq171761 73.4 2e-11 seq169872 73.4 2e-11 seq162097 73.4 2e-11 seq77 73.4 2e-11 seq28 73.4 2e-11 seq170 71.6 8e-11 >seq11402 Length=7298 Score = 102 bits (112), Expect = 5e-20 Identities = 70/75 (93%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||||||||| || |||||||||| |||||||||| ||||||||||||||||||| Sbjct 6110 TCTCACTAAGCCATT-CAATCGGTAGTAA-CGACGGGCGGTGTGTACAAAGGGCAGGGAC 6053 Query 108 GTAATACAACGCAAG 122 ||||| ||||||||| Sbjct 6052 GTAAT-CAACGCAAG 6039 >seq192427 Length=99138 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 49257 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 49200 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 49199 TAAT-CAATGCGAG 49187 >seq179915 Length=6486 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 5664 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 5721 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 5722 TAAT-CAATGCGAG 5734 >seq171761 Length=10880 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 8311 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 8368 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 8369 TAAT-CAATGCGAG 8381 >seq169872 Length=6882 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 5081 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 5024 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 5023 TAAT-CAATGCGAG 5011 >seq162097 Length=7526 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 4487 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 4544 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 4545 TAAT-CAATGCGAG 4557 >seq77 Length=18294 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1575 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1632 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 1633 TAAT-CAATGCGAG 1645 >seq28 Length=10842 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 4246 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 4189 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 4188 TAAT-CAATGCGAG 4176 >seq170 Length=11158 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAA-GCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 |||||||| ||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 6007 CTCACTAAATAATT-CAATCGGTAGTAGCGCGACGGGCGGTGTGTACAAAGGGCAGGGAC 6065 Query 108 GTAATACAACGCAAG 122 |||| ||| || || Sbjct 6066 TTAAT-CAATGCGAG 6079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300257262800