Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq192360 159 8e-37 seq47705 111 4e-22 >seq192360 Length=5402 Score = 159 bits (176), Expect = 8e-37 Identities = 292/413 (71%), Gaps = 21/413 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAAC-TTGAC 59 ||||||||| | || ||||||||||||| ||||||||||| | | || ||| |||| Sbjct 4014 CGACTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACCCTGCTCCGATTAACGTTGAA 3955 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGA----TTCCCACCCGTCACACGCTACTCAT 115 | |||| |||||| |||| | |||| ||| | ||| | | ||| ||||||| Sbjct 3954 CA-GGAAACCTTGGTCTTTCGGTGT--GGGAGTCTTTCACTCCCATTA-ACGTTACTCAT 3899 Query 116 GCCTGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGC-TTCACCACTG 173 | | |||||| |||| | || | ||||| | | |||| | | ||| || | Sbjct 3898 GTCAGCATTCGCACTTCTGAT-ACCTCCAGAAT-CTCTCACGAGTATTCCTTCTCCGGCG 3841 Query 174 -ACACGACGCTCCCCTACCC---AACCAC-ACAGGTTG---CCACAGCTTCGGCGGATAA 225 ||| ||||||||||||| || | | | || || ||||||||| || Sbjct 3840 TACAGAACGCTCCCCTACCACTTAATATCTAAATATTAAATCCGCAGCTTCGGTATATCG 3781 Query 226 CTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCT 285 ||||||||||| | || || |||| | ||| ||| ||||||||||||||| ||| Sbjct 3780 CTTAAGCCCCGTTGAATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCT 3721 Query 286 TTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC 345 || || |||||||||||| |||||||| |||| | |||||| || ||||||| ||| Sbjct 3720 TTAAATGATGGCTGCTTCTAAGCCAACATCCTAGCTGTCTATGCCTTCCCACATCGTTTA 3661 Query 346 CCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||||||| | | |||||| ||||||||| | |||||| ||||||||||| Sbjct 3660 CCACTGAGCGATAATTTAGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 3608 >seq47705 Length=4283 Score = 111 bits (122), Expect = 4e-22 Identities = 114/147 (78%), Gaps = 3/147 (2%) Strand=Plus/Minus Query 257 CACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTC 315 |||| ||| |||||||| ||||||||||||| || || ||||||||||||||||||| || Sbjct 3593 CACTCGACTAGTGAGCTGTTACGCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATC 3534 Query 316 CTGGTTGTCTACGCAACTCCACATCCTT--TCCCACTGAGTCACCACTTAGGGGCCTTAG 373 || | ||||| | | | ||| || || | | ||| | || || ||| |||||| Sbjct 3533 CTAGCTGTCTCGGTAGCAACACTTCGTTAATTCAACTTAACATGCATTTGGGGACCTTAG 3474 Query 374 CTGATGATCTGGGCTGTTTCCCTCTCG 400 |||||| |||||| | ||||||||||| Sbjct 3473 CTGATGGTCTGGGTTCTTTCCCTCTCG 3447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175333591040