Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq192360 244 2e-62 seq47705 230 4e-58 >seq192360 Length=5402 Score = 244 bits (270), Expect = 2e-62 Identities = 228/290 (79%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||||||||||||||||| | |||| | | |||||||||| |||||| Sbjct 1268 CCCATGCTTTCGCGCCTCAGCGTCAGTGTTGGCCCAGGTAGCTGCCTTCGCCATTGGTGT 1209 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||||||||||||||||||| | ||||||| | |||| | ||| Sbjct 1208 TCCTTCTGATATCTACGCATTTCACCGCTACACCAGAAATTCCGCTACTCTCTACCACAC 1149 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | |||| | ||||||| |||||||||| | |||||||||| ||| Sbjct 1148 TCTAGTTACCCAGTATTAAATGCAATTCCCAGGTTGAGCCCGGGGCTTTCACATCTAACT 1089 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | |||||||| |||||||||| |||| ||| |||| |||||||||| ||| || Sbjct 1088 TAAGAAACCGCCTACGCGCCCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCG 1029 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct 1028 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCTTCAGGTA 979 >seq47705 Length=4283 Score = 230 bits (254), Expect = 4e-58 Identities = 220/282 (78%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| |||||||||||||||| || || | |||| ||| | ||| || Sbjct 1247 CCCACGCTTTCGTGCCTCAGCGTCAGTTATACCTTAGTAAGCTGCCTGCGCAATTGGAGT 1188 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || || ||||||| ||||||||||||||||| |||||||| | | || | || Sbjct 1187 TCTTCGTGATATCTATGCATTTCACCGCTACACCACGAATTCCGCCTACTTCATCTATAC 1128 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||||| | ||||||||| ||| | ||||||||| | |||||| |||||| Sbjct 1127 TCAAGAATACCAGTTTCAACGGCAATTTTAAGGTTGAGCCTCAAACTTTCACCGCTGACT 1068 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | |||||||||| | ||||||| ||||||||||||||||||||||| || ||| || Sbjct 1067 TAATATCCCGCCTACGCACCCTTTAAACCCAATAAATCCGGATAACGCTCGCATCCTCCG 1008 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| |||||||| Sbjct 1007 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTC 966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827254738660