Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq58108 143 2e-32 seq192360 104 2e-20 >seq58108 Length=1450 Score = 143 bits (158), Expect = 2e-32 Identities = 116/139 (83%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||| Sbjct 630 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 571 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| | |||||| | |||| ||||||| |||||||| ||| ||| ||||||| | Sbjct 570 CTTTCGTACCTGCTCGACTTGTCTGTCTCGCAGTCAAGCACCCTTATGCTTTTGCACTCA 511 Query 120 TCACTACGATTTCCGACCG 138 | ||||||||||||| Sbjct 510 AAAGCGCGATTTCCGACCG 492 >seq192360 Length=5402 Score = 104 bits (114), Expect = 2e-20 Identities = 95/119 (80%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAG-CCACCGGATCACTATGACCT 59 |||||||||||| ||||||||||||| |||||||| | |||||||||||||||| || Sbjct 5068 TACCTTTTATCCTTTGAGCGATGGCCATTCCATTCTGAAACCACCGGATCACTATGCTCT 5009 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | |||| | |||| || |||||| | ||| ||||||| |||| Sbjct 5008 AGTTTCCTACCTGATCGACTTGTGGGTCTCTCAGTCAAGCGCGCTTATGCCATTACACT 4950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351364882000