Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq58108 158 1e-36 seq192360 98.7 9e-19 >seq58108 Length=1450 Score = 158 bits (174), Expect = 1e-36 Identities = 130/157 (83%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct 618 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTG 559 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT-AACCTCACGATGT 142 ||||| ||| |||||||||||||| ||||||| ||||||| || | |||| | Sbjct 558 CTCGACTTGTCTGTCTCGCAGTCAAGCACCCTTATGCTTTTGCACTCAAAAGCGCGATTT 499 Query 143 CCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| | | || |||||||| ||||||||||| Sbjct 498 CCGACCGCGCTGAGGGTACCTTCGTACTCCTCCGTTA 462 >seq192360 Length=5402 Score = 98.7 bits (108), Expect = 9e-19 Identities = 86/106 (81%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAA-CCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||| |||||||| ||| |||||||||||||||| || |||| ||||| Sbjct 5055 TTGAGCGATGGCCATTCCATTCTGAAACCACCGGATCACTATGCTCTAGTTTCCTACCTG 4996 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || |||| ||||||||| |||||||||||| |||| Sbjct 4995 ATCGACTTGTGGGTCTCTCAGTCAAGCGCGCTTATGCCATTACACT 4950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472716993520