Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq192360 379 5e-103 seq47705 185 2e-44 >seq192360 Length=5402 Score = 379 bits (420), Expect = 5e-103 Identities = 334/411 (81%), Gaps = 4/411 (1%) Strand=Plus/Minus Query 6 TTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTG 65 |||||||||||||||||||||| | |||||||||| ||||| |||||||| ||||||||| Sbjct 923 TTACAACCCGAAGGCCTTCTTCCTCCACGCGGCATTGCTGCGTCAGGCTTTCGCCCATTG 864 Query 66 TGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTG 125 | || |||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 863 CGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTG 804 Query 126 GCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAA 185 |||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | |||| Sbjct 803 GCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAA 744 Query 186 CTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGT 245 |||||||||| | || ||||| ||| | ||| |||||||||||| |||| Sbjct 743 CTAGCTAATCTTGCATAGGCTCATCTTTTAGCGCAAGGTCCGAAGGTCCCCTGCTTTAAA 684 Query 246 CTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAG 305 | | | || ||||||||||||| |||| ||| |||||||| | || |||||| Sbjct 683 CCGTAGTCCACATCCGGTATTAGCCACTCTTTCGAGTAGTTATCCCAAACTATAAGGCAG 624 Query 306 TTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGC-GAAGCAGCAAGCTGCTTCC-T 363 |||| | ||||||||||||||||||||||| || | |||| || || || ||||| | Sbjct 623 ATTCCTATGTATTACTCACCCGTCCGCCACTCGCCATCAGAAG-AGTAAACT-CTTCCAT 566 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | | ||||||||||||||||||||| || | |||||||||||||||||||| Sbjct 565 GCTGCCGTTCGACTTGCATGTGTTAAGCATACCGCCAGCGTTCAATCTGAG 515 >seq47705 Length=4283 Score = 185 bits (204), Expect = 2e-44 Identities = 300/424 (71%), Gaps = 21/424 (5%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCT-TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||| | || || | |||||| | |||||| |||| |||||| |||| Sbjct 910 TTTACAACCCGTAGGGCAGTCATCCTTCACGCGACTTGGCTGGTTCAGACTTGCGTCCAT 851 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 850 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTG 791 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| | | | |||||||| | ||| ||||| |||| ||| ||| ||||| | || Sbjct 790 TGGGGGATAAACCTCTCAGTTCCCCTATTCATCGTTGCCTTGGTAAGCCGTTACCTCACC 731 Query 184 AACTAGCTAAT----CCCATCTGGGTTCATCCGATAGTGAGAGGCC-----CGAAGGTCC 234 ||||||||||| | ||| | |||| || || | | | ||| | Sbjct 730 AACTAGCTAATGAAACGCAT----GCCCATCTACTACCGATATCTCTTTAACAAAGATTT 675 Query 235 CCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCT 294 || | || | | ||||||||||||| | |||| | || ||||||||| Sbjct 674 CC--ATGCGGAATCCCTGTTTTATGCGGTATTAATCCGTCTTTCAACGGGCTATCCCCCT 617 Query 295 CCATCAGGCAGTTTCCCAGAC--ATTACTCACCCGTCCGCCACTCGTCAGCGA-AGCAGC 351 | |||||| || || || |||||||||||| |||| ||| || | | ||| Sbjct 616 GTAGTAGGCAGGTT-GCATACGTGTTACTCACCCGTGCGCCGGTCGCCAACTATTTTAGC 558 Query 352 AAGCT-GCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATC 410 ||||| | || | || ||||||||||||||||||||||| ||| |||||||| | Sbjct 557 AAGCTAAAATATTGATGCCCCTCGACTTGCATGTGTTAGGCCTGTCGCTAGCGTTCATCC 498 Query 411 TGAG 414 |||| Sbjct 497 TGAG 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1220047368960