Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq192360 311 3e-82 seq47705 268 3e-69 >seq192360 Length=5402 Score = 311 bits (344), Expect = 3e-82 Identities = 283/360 (79%), Gaps = 29/360 (8%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||||||| ||| || |||||||||||||| |||||||||| | | ||||| Sbjct 734 GATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAG 793 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||||||||| Sbjct 794 GATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGG 853 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||| || | |||||||| ||||||||| ||||||| |||||||| || ||||||||| Sbjct 854 GAATTTTCCGCAATGGGCGAAAGCCTGACGCAGCAATGCCGCGTGGAGGAAGAAGGCCTT 913 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGA----TAA----------------------- 379 ||||| || |||| || | | ||| ||| ||| Sbjct 914 CGGGTTGT-AAGCACTTTTGTTCAGGGAGAATGGTAATTGGGGTTAATACCCTCAGTTGC 972 Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||| | ||| ||| || |||| |||||||||| |||||||||||||||||||||||| | Sbjct 973 TGATGTTACCTGAAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGA 1032 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 ||| || ||||||| |||||||||| |||||||||||| ||||||| |||||||||||| Sbjct 1033 GGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGGGCGCGTAGGCGGTTTCTTAAGT 1091 >seq47705 Length=4283 Score = 268 bits (296), Expect = 3e-69 Identities = 277/360 (77%), Gaps = 21/360 (6%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 |||| | |||||||||||||| |||||||||||||||||||| ||||| | ||| || | Sbjct 713 GCGTTTCATTAGCTAGTTGGTGAGGTAACGGCTTACCAAGGCAACGATGAATAGGGGAAC 772 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 ||||||| | ||| ||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 773 TGAGAGGTTTATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 832 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA- 339 |||| ||||||||| |||||| | ||| |||| |||| | | ||||||| ||||| Sbjct 833 AGTGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAGCCAAGTCGCGTGAAGGATGAC 892 Query 340 AGGCCTTCGGGTCGTAAAGCTC---TGTCCTCAAGGAAGA-TAATGACG-----GTACTT 390 | ||| ||||| ||||| || ||| || || || | ||| |||| ||||| Sbjct 893 TGCCCTACGGGTTGTAAACTTCTTTTGTACTAGAGTAAAACTAAGGACGAGTCCTTACTT 952 Query 391 G----------AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAG 440 | | || |||| ||||||||| |||||||||||||||||||||||| || Sbjct 953 GCAAGTACAGTACGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAG 1012 Query 441 GGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | || ||||||||||||| ||| | ||| ||||||||||||||| || | ||||||| Sbjct 1013 GATGCGAGCGTTATCCGGATTTA-TTGGGTTTAAAGGGTGCGTAGGCGGGATATTAAGTC 1071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1494717719040