Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19]
192,460 sequences; 549,932,840 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq192360 311 3e-82
seq47705 268 3e-69
>seq192360
Length=5402
Score = 311 bits (344), Expect = 3e-82
Identities = 283/360 (79%), Gaps = 29/360 (8%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
||||||||||||||| ||| || |||||||||||||| |||||||||| | | |||||
Sbjct 734 GATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAG 793
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||||||||||
Sbjct 794 GATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGG 853
Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346
|||| || | |||||||| ||||||||| ||||||| |||||||| || |||||||||
Sbjct 854 GAATTTTCCGCAATGGGCGAAAGCCTGACGCAGCAATGCCGCGTGGAGGAAGAAGGCCTT 913
Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGA----TAA----------------------- 379
||||| || |||| || | | ||| ||| |||
Sbjct 914 CGGGTTGT-AAGCACTTTTGTTCAGGGAGAATGGTAATTGGGGTTAATACCCTCAGTTGC 972
Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439
||| | ||| ||| || |||| |||||||||| |||||||||||||||||||||||| |
Sbjct 973 TGATGTTACCTGAAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGA 1032
Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499
||| || ||||||| |||||||||| |||||||||||| ||||||| ||||||||||||
Sbjct 1033 GGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGGGCGCGTAGGCGGTTTCTTAAGT 1091
>seq47705
Length=4283
Score = 268 bits (296), Expect = 3e-69
Identities = 277/360 (77%), Gaps = 21/360 (6%)
Strand=Plus/Plus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
|||| | |||||||||||||| |||||||||||||||||||| ||||| | ||| || |
Sbjct 713 GCGTTTCATTAGCTAGTTGGTGAGGTAACGGCTTACCAAGGCAACGATGAATAGGGGAAC 772
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280
||||||| | ||| ||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct 773 TGAGAGGTTTATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 832
Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA- 339
|||| ||||||||| |||||| | ||| |||| |||| | | ||||||| |||||
Sbjct 833 AGTGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAGCCAAGTCGCGTGAAGGATGAC 892
Query 340 AGGCCTTCGGGTCGTAAAGCTC---TGTCCTCAAGGAAGA-TAATGACG-----GTACTT 390
| ||| ||||| ||||| || ||| || || || | ||| |||| |||||
Sbjct 893 TGCCCTACGGGTTGTAAACTTCTTTTGTACTAGAGTAAAACTAAGGACGAGTCCTTACTT 952
Query 391 G----------AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAG 440
| | || |||| ||||||||| |||||||||||||||||||||||| ||
Sbjct 953 GCAAGTACAGTACGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAG 1012
Query 441 GGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
| || ||||||||||||| ||| | ||| ||||||||||||||| || | |||||||
Sbjct 1013 GATGCGAGCGTTATCCGGATTTA-TTGGGTTTAAAGGGTGCGTAGGCGGGATATTAAGTC 1071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1494717719040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |