Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq47705 396 9e-108 seq192360 383 6e-104 >seq47705 Length=4283 Score = 396 bits (438), Expect = 9e-108 Identities = 439/576 (76%), Gaps = 27/576 (5%) Strand=Plus/Plus Query 4 AGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||| ||||||||| |||| |||| |||||| |||||||||||||||||||| || Sbjct 3112 AGTCTTAACAGGGCGCTTTAGTCAATGGGAGTAGACGCGAAACCAAGTGATCTACCCTTG 3171 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 |||| ||||| | |||||||| | |||||| ||| ||| | |||||||| | Sbjct 3172 AGCAGGTTGAAGATTGGGTAACACCACTTGGAGGACCGCACCGGTAAGCGTTGAAAAGCT 3231 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 |||||| || |||||||||||||||||||| |||||||||| |||||| || ||| Sbjct 3232 TTCGGATGACTTGAGGGTAGGGGTGAAAGGCTAATCAAACTTGGAGATAGCTCGTACTCC 3291 Query 182 CCGAAAACTATTTAGGTAGTGCCTC----AAGTATCACCATCGGGGGTAGAGC-ACTGTT 236 |||||| |||||||| ||||| || ||| || || |||||| |||| | Sbjct 3292 CCGAAATGCATTTAGGTGCAGCCTCGGCTAAATATTTGTGTCAGG--TAGAGCTACTGAT 3349 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296 ||| | | || | | | | || ||| | |||||||||||| ||| | || Sbjct 3350 -TGGATGCGAGGGCTTCACCGCCTATCAAGTCCAGATAAACTCCGAATGGGCACAAATTA 3408 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 || | ||||||||||||||||||||||||||||| || |||||||| ||||| || ||| Sbjct 3409 TAAC-CGGGAGTGAGGGCATGGGTGCTAAGGTCCATGTCCGAGAGGGAAAGAACCCAGAC 3467 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA---A 413 ||||||||||| ||| ||||| | |||||| || ||||||||| |||||| | Sbjct 3468 CATCAGCTAAGGTCCCCAAATGCATGTTAAGTTGAATTAACGAAGT---GTTGCTACCGA 3524 Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3525 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 3584 Query 474 AGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGA 533 ||||||| | |||||||||||||||||| || || || |||||||||| ||||| Sbjct 3585 AGTCGAGTGGCGATGCGTGGATAATAATCGGGCATAAACATG-CTACCGAAGCTATGGGA 3643 Query 534 TCA--TTTAT-------ATGATCGGTAGGGGAGCAT 560 | | ||||| ||| ||||||||||||| Sbjct 3644 TAAATTTTATCGGTTGCGTGAGTGGTAGGGGAGCAT 3679 >seq192360 Length=5402 Score = 383 bits (424), Expect = 6e-104 Identities = 401/521 (77%), Gaps = 7/521 (1%) Strand=Plus/Plus Query 10 AACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGA 68 || |||||| || ||||| |||| |||||||||||||||| |||||| ||||||||||| Sbjct 3277 AATAGGGCGTCAAGTCGCAGGGTATAGACCCGAAACCAAGCGATCTATCCATGGCCAGGC 3336 Query 69 TGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGAT 128 |||| || |||||||| | ||||| |||||||||| ||||| || | |||||| Sbjct 3337 TGAAAGTTAGGTAACACTGACCGGAGGGCCGAACCCACATCTGTTGCAATAGATGGGGAT 3396 Query 129 GAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAA 188 ||||||||| | || |||||||||||| ||| |||||| ||||||||||||| |||||| Sbjct 3397 GAGCTGTGGATCGGAGTGAAAGGCTAATCAAGCTTGGAGATAGCTGGTTCTCCCCGAAAG 3456 Query 189 CTATTTAGGTAGTGCCTCAAGTA--TCACCATCGGGGGTAGAGCACTGTTATGGCTAGGG 246 |||||||||||| |||||| ||| |||| |||||||||||||||||| |||||||| Sbjct 3457 CTATTTAGGTAGCGCCTCATGTAATTCACTTCCGGGGGTAGAGCACTGTTTCGGCTAGGG 3516 Query 247 GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGA 306 |||||| ||||||||||| || |||||||||||||| | ||| | | |||| Sbjct 3517 GGTCATCCCGACTTACCAACCCGATGCAAACTCCGAATACCAGAAAGTGCAATCATGGGA 3576 Query 307 GTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAA 366 | | ||||||||| |||||| ||||| || || || ||| ||||||| Sbjct 3577 GACACACAGCGGGTGCTAACGTCCGTTGTGAAGAGGGAAACAACCCAGACCGCCAGCTAA 3636 Query 367 GGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATG 426 || ||| |||| | ||| ||| | ||||| || || || |||||||||||||| Sbjct 3637 GGTCCCTAAATTATCGCTCAGTGGTA--AACGATGTGGGAAGGCATAGACAGCTAGGATG 3694 Query 427 TTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCG 486 ||||||| |||||||||| ||||||||||| |||||| ||||||||||||||| | | Sbjct 3695 TTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTAGTCGAGTCGGCC 3753 Query 487 GGCGTGG-ATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526 ||| || | | | | |||| ||||| | ||||||||| Sbjct 3754 TGCGCGGAAGATTCAACGGGGCTTAAGCGATATACCGAAGC 3794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1686348195840