Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq171562 237 3e-60 seq192360 141 2e-31 seq47705 129 1e-27 >seq171562 Length=979 Score = 237 bits (262), Expect = 3e-60 Identities = 251/323 (78%), Gaps = 12/323 (4%) Strand=Plus/Minus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 |||||| |||||||||||||||||||||||||||||||||| | || ||||| ||||| Sbjct 443 ACATGGCGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGGAAGTCTGCGAAAAGCTT 384 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC-CCTT 124 ||||||| |||| || |||||||||| |||| ||||||||||||||||| || Sbjct 383 CGGGGAGCTGGCAATCAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCAGCTGACA 324 Query 125 TGGGTCA-TTGC----ATGCTGAATACATAGG-TATGCAAAGCGAACGCGGCGAACTGAA 178 | |||| || | || ||||||||||||| || | | ||||||| || |||||||| Sbjct 323 TAAGTCAGTTACTCTTAT-CTGAATACATAGGATAAGTAGAGCGAACCTGGTGAACTGAA 265 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||| Sbjct 264 ACATCTAAGTAACCAGAGGAAAAGAAATCAATTGAGATTCCCGCAGTAGTGGCGAGCGAC 205 Query 239 ATGGGATGAGCCTTTACGAGATAGTTGAATTG--ATAGTGGAATCCTCTGGAAATAGGAG 296 ||||| ||||| || | |||| | |||| |||| |||| || || || Sbjct 204 CTGGGAGGAGCCGATATGTGATAACT--ATTGCAATAGAAGAATGGCATGACAAGGCCAG 147 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 || ||| |||||||||||||||| Sbjct 146 CCGTAGAGGGTGATAGCCCCGTA 124 >seq192360 Length=5402 Score = 141 bits (156), Expect = 2e-31 Identities = 183/252 (73%), Gaps = 13/252 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | || ||| ||||||||||| | ||||||| Sbjct 2443 AGAGCAAACGGTGGATGCCTTGGCATCTGGAGCCGAAGAAGGACGTAGCAATCTGCGATA 2502 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC--- 117 ||| ||||||||| || |||||| ||||||| | | ||||||||||||||||| Sbjct 2503 AGCCTCGGGGAGTGGATAAGCACACTGTGATCCGAGGGTGTCCGAATGGGGAAACCCCGC 2562 Query 118 --GGCCCTTTG-------GGTCATTGCATGCTGAATACATA-GGTATGCAAAGCGAACGC 167 ||| || || | | | ||||||| ||| || | | || ||||| Sbjct 2563 TGGGCGGCGTGCCGACCCAGTGACTCCCGCCTGAATATATAGGGCGGGTAGAGGGAACGT 2622 Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 || ||| |||||||||| |||| | |||||| ||||| |||||| |||||| ||||| Sbjct 2623 GGGGAAGTGAAACATCTCAGTACCCACAGGAAGAGAAAGCAACCGCGATTCCGTTAGTAG 2682 Query 228 TGGCGAGCGAAA 239 |||||||||||| Sbjct 2683 TGGCGAGCGAAA 2694 >seq47705 Length=4283 Score = 129 bits (142), Expect = 1e-27 Identities = 184/253 (73%), Gaps = 12/253 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || |||||||| |||||||| ||| | |||||| ||||||||| || ||||| | Sbjct 2460 AGGGCACATGGGGGATGCCTAGGCTCTCGAAGGCGAAGAAGGACGTGATAAGCTGCGAAA 2519 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||| | ||||||| | | |||| |||| ||||||||||| ||||||| Sbjct 2520 AGCTTGGGGTAA-GAGCAAATATCTATAAATCCCAAGATCTCCGAATGGGGCAACCCGG- 2577 Query 121 CCTTTG--GGTCATTGCATG-CTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGA 177 | | | ||| || | || || || | || |||||||| || ||||||| Sbjct 2578 ---TAGAAGAAGATTCTATCACACAACGCA-AGTTGTG---AGCGAACGTGGGGAACTGA 2630 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 |||||||||||| | ||||||| ||| ||| | |||||||||||||||||||||||| Sbjct 2631 AACATCTAAGTACCCATAGGAAAATAAAACAAAAGTGATTCCCAAAGTAGTGGCGAGCGA 2690 Query 238 AATGGGATGAGCC 250 | ||||| |||| Sbjct 2691 ACTGGGAGAAGCC 2703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 916632447360