Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq58108 365 2e-98 seq192360 322 2e-85 seq131842 104 8e-20 >seq58108 Length=1450 Score = 365 bits (404), Expect = 2e-98 Identities = 427/567 (75%), Gaps = 15/567 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCT-GATTGC 59 ||||||||| ||||||||||||||| ||||| ||| || |||||| | | |||| | Sbjct 557 TCGACTTGTCTGTCTCGCAGTCAAGCACCCTTATGCTTTTGCACTCAAAAGCGCGATTTC 498 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | ||| |||||||| ||||| | | |||||||||| ||| ||||| | |||||||| Sbjct 497 CGACCGCGCTGAGGGTACCTTCGTACTCCTCCGTTACTCTTTCGGAGGAGA-CCGCCCCA 439 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGA-TATCC 178 || ||||||||||||| || ||||||| | |||||| |||| || |||||||| | || Sbjct 438 GTCAAACTACCCACCATACAATGTCCCCGATCCAGATAATGGACCTAGGTTAGAATTTCA 379 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | || ||| |||||||||||| | | ||||| ||| |||| | | ||| | Sbjct 378 AATATTA-CAGGGTGGTATTTCAAGGATGGCTCCATGCAGACTGGCGTCCACACTTCAAA 320 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGC-CAATACCAAGCTATAGTGAAGGT 297 | ||||||||||||||||||| | | |||| || | ||||||||||| ||||| Sbjct 319 GCCTCCCACCTATCCTACACATCAAGGTTC-AATGTTCAGTGTCAAGCTATAGTAAAGGT 261 Query 298 CC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCA 356 | |||||||||| |||| ||||||| | | ||||||| || | | |||||||| Sbjct 260 TCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGATTTCAATTTCA 201 Query 357 CCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTA 416 | | | || ||| |||||||| || || ||||||| ||||||| |||||||||||| Sbjct 200 CTGAGTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCTTTCGTGCGGGTCGGAACTTA 141 Query 417 CCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGC 476 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 140 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGC 81 Query 477 TTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCA 536 ||| || | || || | | || ||| || | |||||||||||||| Sbjct 80 TTCGATCAAGAGCTTCGC------CTTG--CGGCTGACCCCATCAATTAACCTTCCAGCA 29 Query 537 CCGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||||| || ||||| || Sbjct 28 CCGGGCAGGCGTCAGACCCTATACGTC 2 >seq192360 Length=5402 Score = 322 bits (356), Expect = 2e-85 Identities = 414/566 (73%), Gaps = 25/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||| ||||||||| | ||| ||| |||||||| | | || || Sbjct 4994 TCGACTTGTGGGTCTCTCAGTCAAGCGCGCTTATGCCATTACACTCTGCGAACGGTTACC 4935 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | ||||| |||||| | ||||||||||| ||| ||||| | ||| |||||| Sbjct 4934 AATCGTCCTGAGCACACCTTTAGAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 4876 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| || ||||| || | | || | ||||| || | Sbjct 4875 TCAAACTACCCACCATACAGTGTCCTCACTTCTG----TGAG------TTAGAATTCAAA 4826 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | || || ||||||||| | ||||| ||| ||| |||| | || |||| || Sbjct 4825 CAATTAAAGGGTCGTATTTCAAGGATGACTCTGCAAATACTGGCGTACCTGCTTCATTGT 4766 Query 241 CTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 |||| |||||||||||||| || || || ||| | ||| |||||||||| ||||| Sbjct 4765 CTCCGACCTATCCTACACATCAAGTGC-CCAAATTC-AATGTAAAGCTATAGTAAAGGTT 4708 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||||||||| |||| | || ||||||| || |||| ||||||||| Sbjct 4707 CACGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTTCAATTTCAC 4648 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 || || ||||||||||| | | || |||| |||||||||||||||||||||||| Sbjct 4647 CGAGCTCACGGTTGAGACAGTAAGAAGATCATTACACCATTCGTGCAGGTCGGAACTTAC 4588 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 4587 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 4528 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 || || | || | || | | ||| || | ||||||||||||||| Sbjct 4527 TCGATCAAGAGCTT---------CGCGTTACGCTAACCCCATCAATTAACCTTCCAGCAC 4477 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||| || ||||| || Sbjct 4476 CGGGCAGGCGTCAGACCCTATACGTC 4451 >seq131842 Length=691 Score = 104 bits (114), Expect = 8e-20 Identities = 103/135 (76%), Gaps = 10/135 (7%) Strand=Plus/Plus Query 429 TTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCG 488 |||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 1 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATT----- 55 Query 489 CCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGT 548 || | | | || | | || |||||||||||||||||||||||||||| || Sbjct 56 -----CAAAGCTTCTCTTGCGATGACTTCTCCTCTTAACCTTCCAGCACCGGGCAGGTGT 110 Query 549 CAGTCCGTATACCTC 563 ||| | ||||| || Sbjct 111 CAGGCTATATACGTC 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1699123560960