Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq47705 311 2e-82 seq192360 132 1e-28 >seq47705 Length=4283 Score = 311 bits (344), Expect = 2e-82 Identities = 270/331 (82%), Gaps = 3/331 (1%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| Sbjct 998 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCGTACTGTACTTGCAAGTAAGGACTCGT 939 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 |||||| || || ||||||||||||||| |||||| | ||||||||||||| Sbjct 938 CCTTAGTTTTACTCTAGTACAAAAGAAGTTTACAACCCGTAGGGCAGTCATCCTTCACGC 879 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 878 GACTTGGCTGGTTCAGACTTGCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 819 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||||||| |||||||| ||||||| ||| Sbjct 818 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATAAACCTCTCAGTTCCCCTATTCAT 759 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTAC- 299 ||| | || ||| ||||||||| | || |||| |||||| ||||||| |||||| ||| Sbjct 758 CGTTGCCTTGGTAAGCCGTTACCTCACCAACTAGCTAATGAAACGCATGCCCATC-TACT 700 Query 300 ACCGATGAATCTTTAATGATGA-TACCATGC 329 |||||| ||||||| | || | |||||| Sbjct 699 ACCGATATCTCTTTAACAAAGATTTCCATGC 669 >seq192360 Length=5402 Score = 132 bits (146), Expect = 1e-28 Identities = 208/294 (71%), Gaps = 24/294 (8%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||| ||||||||| | ||||| ||| | || | Sbjct 1019 GGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCTTCAGGTA---ACAT----CAGCAACT 967 Query 61 GGAAGGTTTTATTCCC--------TTAT-----AAAAGAAGT--TTACAATCCGTAGAAC 105 | | ||| ||| ||| || | || | |||| |||||| ||| || | Sbjct 966 G-AGGGTATTAACCCCAATTACCATTCTCCCTGAACAAAAGTGCTTACAACCCGAAGG-C 909 Query 106 CTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCAC 165 |||| |||| ||||| | | |||| |||| || ||| |||||| || ||||| ||| Sbjct 908 CTTCTTCCTCCACGCGGCATTGCTGCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCAC 849 Query 166 TGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTC 225 ||||||||||||||||||| ||| |||||||||||| ||| ||||| || | ||||||| Sbjct 848 TGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTC 789 Query 226 AGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 || | ||| ||| | | || ||| || || || | || |||| ||||| Sbjct 788 GGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1066742987520