Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19]
192,460 sequences; 549,932,840 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq47705 311 2e-82
seq192360 132 1e-28
>seq47705
Length=4283
Score = 311 bits (344), Expect = 2e-82
Identities = 270/331 (82%), Gaps = 3/331 (1%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||||||||||||||||||||||| || |||| | |||| || |||
Sbjct 998 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCGTACTGTACTTGCAAGTAAGGACTCGT 939
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
|||||| || || ||||||||||||||| |||||| | |||||||||||||
Sbjct 938 CCTTAGTTTTACTCTAGTACAAAAGAAGTTTACAACCCGTAGGGCAGTCATCCTTCACGC 879
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 878 GACTTGGCTGGTTCAGACTTGCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 819
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||||||| |||||||| ||||||| |||
Sbjct 818 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATAAACCTCTCAGTTCCCCTATTCAT 759
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTAC- 299
||| | || ||| ||||||||| | || |||| |||||| ||||||| |||||| |||
Sbjct 758 CGTTGCCTTGGTAAGCCGTTACCTCACCAACTAGCTAATGAAACGCATGCCCATC-TACT 700
Query 300 ACCGATGAATCTTTAATGATGA-TACCATGC 329
|||||| ||||||| | || | ||||||
Sbjct 699 ACCGATATCTCTTTAACAAAGATTTCCATGC 669
>seq192360
Length=5402
Score = 132 bits (146), Expect = 1e-28
Identities = 208/294 (71%), Gaps = 24/294 (8%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||||||||||||| ||||||||| | ||||| ||| | || |
Sbjct 1019 GGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCTTCAGGTA---ACAT----CAGCAACT 967
Query 61 GGAAGGTTTTATTCCC--------TTAT-----AAAAGAAGT--TTACAATCCGTAGAAC 105
| | ||| ||| ||| || | || | |||| |||||| ||| || |
Sbjct 966 G-AGGGTATTAACCCCAATTACCATTCTCCCTGAACAAAAGTGCTTACAACCCGAAGG-C 909
Query 106 CTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCAC 165
|||| |||| ||||| | | |||| |||| || ||| |||||| || ||||| |||
Sbjct 908 CTTCTTCCTCCACGCGGCATTGCTGCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCAC 849
Query 166 TGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTC 225
||||||||||||||||||| ||| |||||||||||| ||| ||||| || | |||||||
Sbjct 848 TGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTC 789
Query 226 AGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
|| | ||| ||| | | || ||| || || || | || |||| |||||
Sbjct 788 GGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1066742987520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |