Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq173136 448 4e-121 seq172082 417 6e-112 seq151072 140 3e-28 seq133038 84.2 2e-11 >seq173136 Length=30018 Score = 448 bits (496), Expect = 4e-121 Identities = 1159/1761 (66%), Gaps = 39/1761 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| || || | || || || | ||||||||||||||| Sbjct 3882 ATCTACAGTAAATTGTATAGCATTGGCGGCTGGTTTTGTTCTTAAATAGTACATGCCGGT 3823 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||| | |||||| ||||| ||||||||| || || | |||||| | ||||| || || Sbjct 3822 CTTTAAGCCAGCCTTCCAAGAATAGAAATGTATAGAGGTTAATTTACCGTAATTAGGTTC 3763 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || || || || ||||| ||||| ||| || |||||||| || ||||| Sbjct 3762 AGCTACGTGTATGTTAAAGGATTGACTTTGATCTATGAAAGCGCCACGATCGGCGGCCAT 3703 Query 65257 GTCAATGATAC----GACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCT 65312 | ||| | | |||| || || ||||| || ||||| || ||| ||| | | Sbjct 3702 TTTAATTGTGCTCTTGACG----GAAATTTCCCAAACTGTCTTATAAAGGTCACGAATAT 3647 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 | ||||| || || ||| | || | || || ||| | ||||| ||| || Sbjct 3646 TTTTGGGAATTTCTTCTATGGCTTGTATAGATCCGCGATTGGATATAATTTTATTTTTCA 3587 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | || ||||||| | | || | | || || | || ||| |||| | || | Sbjct 3586 TATTATCATCCCACAAATCAAGTTCTGTTAAATCTTTCAATAAATGATGATTAACAACAT 3527 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||| || || || || ||||| ||| ||| ||||| || || |||||||| |||| Sbjct 3526 TGAATTCTCCTGATAGCACACGTCGGGTATATATGTTAGAAGTATAAGGTTCAAATGATT 3467 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || | ||||| | ||| || || |||||||| || ||||||||||| | | ||| |||| Sbjct 3466 CATTATTGCCCAAAATCTGAGCGGTAGATGCTGTAGGCATGGGAGCAATAAGCAAAGAGT 3407 Query 65553 TTCGCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGT 65608 | || | || ||| || || || | ||| | ||| | ||||| || || Sbjct 3406 TACGTACACCATGTTGCTTG--ATTTTTTCTTTTAATGCCGACCAATCCCACAAGTCAGT 3349 Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 | | | ||||||||| | ||| || |||| | || | || | Sbjct 3348 AGGTGTTTTATT--------CCACATATCATATTGTAGTATTCCTTTGCTAACTGGACAG 3297 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCG 65728 ||| | | | || || || | | | || | || ||| |||| ||| | || Sbjct 3296 CCGGGATAGGTTTCATATGTACCATATTTTTCTGCCAATTCACAACTGGCCTCTAAGGCA 3237 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 || |||||||||| || || || || | || | | | |||| || ||||| || Sbjct 3236 CCATAATAAATGGTTTCAAATATTTGTTGGTTCAATAAAAAGGCCTGTTCACTCTCATAG 3177 Query 65789 GGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 || | | ||| | | ||||| || || | ||| || || || ||||| ||||| ||| Sbjct 3176 GGGAAGCGCATTAAAATCAAAGTATCAGCAAAACCCTGGACACCTATACCAATGGGGCGA 3117 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 ||||||| ||| || | ||||| || | || || ||||| || || ||||| | Sbjct 3116 TGACGCAGATTAGATTTCTTTGCCTCTGGCAGGGGATAATAATTTATGTCTATAATTTTA 3057 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTA 65968 || ||||| | || | || | | | | ||||| | || || || ||||| Sbjct 3056 TTTAAATTCCTGGTAATAACTTTAGTAACATTTTTCAATTTCTTAAAGTCGAA-TGTTTT 2998 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 || || || |||||| | ||| |||| || || | || || Sbjct 2997 C-----TCAGGTGTA---------ACAAACATATTAAGCGCAATGGAGGCCAAATTACAA 2952 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || ||||| || || || || | ||| || |||||||| || ||||| || ||||| Sbjct 2951 ACGGCTATTTCATCGGGGGCAGAATATTCTACAATTTCTGTACACAGGTTGCTGCATTTA 2892 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || ||||| | ||| || || |||||||||||||| || ||||||||||| | |||||| Sbjct 2891 ATAGTGCCTATATTTTGCTGGTTACTCTTGCGATTACAGGCATCCTTGTATAACATGTAG 2832 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || || || || || ||||||| |||||||||||| ||| ||||| ||||||| || Sbjct 2831 GGTGTACCAGTTTCTACTTGGGCCTCAATGATGGCAAACCATAGAGCCTGTGCCTTAACA 2772 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 || || || | |||| ||| || | || | ||||| || ||||||| Sbjct 2771 GTGCGATTAGCTTTGCCTTCTTTTTCATACTTGGTATACAACTGTTCAAACTCTTCACCC 2712 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || || ||| | ||||| || || |||||||| | ||||| ||||| | | | Sbjct 2711 CAGACATCCTGCAGGCCGGGACATTTATGGGGACACATTAAGGACCAGTCACCGTTTTCT 2652 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 ||||| | |||||| | || || ||||| | || || || ||||| | |||| Sbjct 2651 TCTACTCTTTTCATAAACAAGTCGGGAATCCATAAAGCATAAAAAAGATCTCTAGCTCTG 2592 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||||| || | || |||||| || || | || ||||| || || | |||||| Sbjct 2591 TGCTCTTCTTTACCAGTATTTTTCTTTAAATCTAAAAATTCAAAAATATCTGAATGCCAA 2532 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 ||||||| || || || || | || ||||||||| ||||||||||| || || || Sbjct 2531 GGTTCCAAATAAATAGCAAAGGCTCCAGGACGTTTGCCACCACCTTGGTCTACATAACGG 2472 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 || ||||| || || || | | ||||||||| || || ||||| ||||||| || || Sbjct 2471 GCCACATTATTAAACACCCTAAGCATCGGTACCAGACCATTAGAGGTGCCATTAGTTCCA 2412 Query 66569 TCGAT-GGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 ||||| | | | ||| | |||| ||| ||| ||||| | ||| |||||||| |||| Sbjct 2411 TCGATAGAAGTACCCTTG-GCCCTAATACAGTGGACATTTATACCTATACCACCCGCCGA 2353 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 ||| || || |||||| | |||| | | ||| || || ||||| || ||| || Sbjct 2352 CTTGGAAATCATAGCACATTGTTCCACCGACTTGAAAATACCCTCAATAGAATCAGCCAC 2293 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || |||| ||| |||| || | ||| || | ||||| |||| || | || Sbjct 2292 CATAGTCAACAGGAAGCAAGAGGACAATTGTGGCCTATTAGTGGCAGCCGCAAATAACGT 2233 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 ||| | || || ||||| ||| | ||||| |||| ||||| || ||| | | ||| Sbjct 2232 GGGCGAGGCATGGGTAAAATAACGCTCAGACAACAAATTATACGTTTCTATGGCCGAATC 2173 Query 66808 AATGTTTTCGCCATGAATCCC 66828 ||| | || ||||| || || Sbjct 2172 AATATCCTCTCCATGTATACC 2152 >seq172082 Length=56793 Score = 417 bits (462), Expect = 6e-112 Identities = 531/725 (73%), Gaps = 7/725 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| ||||| ||||| || ||||| || ||| | ||||| || | ||||| Sbjct 15380 AGGCTGAAGCATCCTTTTGGACCGTTGAGGAAGTTGATCTCTCCAAGGATAATTCTGACT 15321 Query 61166 GGGAGCGT-TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224 |||| | ||| ||| | ||||| ||||| ||| ||| || |||| ||||||||| Sbjct 15320 GGGAAAGACTTACCGA-CAATGAACGTCATTTTATTTCACACGTTCTGGCATTCTTTGCC 15262 Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTG 61284 ||||| || ||||| || ||||| ||| | | ||||||||| | || ||||||||||| Sbjct 15261 GCTTCCGATGGTATAGTTAATGAAAATCTTGTTGAACGTTTCTCCCAAGAGGTGCAAGTA 15202 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | ||||| ||||||||||| || ||||| ||||||||||| ||||| ||||| || ||| Sbjct 15201 ACAGAGGCTCGTTGTTTCTATGGTTTCCAAATTGCCATGGAAAATGTACACTCCGAAATG 15142 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404 || ||| || | || || || ||||| | ||| || | |||| ||| | || ||| Sbjct 15141 TATAGTATTTTAATTGACACTTACATTAAGGATCGTGATCAACGAGAATATCTATTTAAT 15082 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464 || || || || || || || || ||||| || || ||||||||| | |||||| | Sbjct 15081 GCTATTGAAACTATGCCAGCTGTTAAGCGTAAGGCCGATTGGGCCATGTCTTGGATTTCA 15022 Query 61465 AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 || | |||||| |||||||| || | | |||||||| | ||||||||| | || Sbjct 15021 TCTAAATCGGCTAATTTTGGTGAGCGTATTATTGCATTTGCTGCTGTCGAGGGTATTTTC 14962 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 |||||||| ||||| | || |||||| | ||||||||||| |||||||| || || Sbjct 14961 TTCAGTGGTAGTTTTGCTTCGATATTTTGGCTCAAGAAACGTGGTCTTATGCCTGGCCTT 14902 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 || ||| |||||| ||||| ||||| || ||||| | |||||||||||||||||||| Sbjct 14901 ACATTCTCCAATGAATTGATCTCACGTGATGAGGGTTTACATTGTGATTTTGCTGTTTTA 14842 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGA-GGAGCGTGTGGGTGAGATTGTTCG 61703 | || |||| || |||| | ||||| | | | ||| | | ||| || || Sbjct 14841 ATGTTTAAAC---ATTTGGTACAACGTCC-TAGTAGGGATAGAATTATTGAAATCATTTC 14786 Query 61704 TGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGG 61763 |||||||||| || ||||||||||| | || || ||| | ||||| | || || Sbjct 14785 GGAGGCGGTAAAAATTGAACAGGAATTCTTAACAGATGCTCTACCCGTAAATTTGATTGG 14726 Query 61764 CATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA 61823 ||||||||| | | |||||| | |||||||| ||||| ||||| ||| ||||||| || Sbjct 14725 TATGAATTGTAAATTGATGTCGGAATATATTGAGTTTGTGGCCGATCGTTTGTTGGTTGA 14666 Query 61824 TTTGG 61828 |||| Sbjct 14665 ATTGG 14661 >seq151072 Length=631 Score = 140 bits (154), Expect = 3e-28 Identities = 132/166 (80%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 61487 AACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAA 61546 || ||||||| |||||||| || || ||| | ||||| ||||| || ||||| || | Sbjct 2 AAAGATTGCTAGCATTTGCATGTGTTGAAGGTATCTTTTTTAGTGGTTCATTTGCTGCTA 61 Query 61547 TCTTTTGGTTGAAGAAACGTGGACTT-ATGCCCGGTCTGACCTTCAGCAATGAGTTGATA 61605 ||||||||||||||||| | |||| ||||| |||||||| | ||||||||| | ||| Sbjct 62 TCTTTTGGTTGAAGAAAAG-AAACTTAATGCCAGGTCTGACTTACAGCAATGAACTAATA 120 Query 61606 TCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCA 61651 ||| | ||||| |||||||||||||| |||||| |||| ||| || Sbjct 121 TCAAGAGACGAAGGCATGCATTGTGAGTTTGCTTGTTTGTTATACA 166 >seq133038 Length=544 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||||| | ||| ||||| | ||||||| |||||| | |||||| | ||||| ||| Sbjct 169 GGACAGAACAGTGACCATTGTCCATCCTTTTCTACTCTTTCCATAAACAAGTCAGGAATC 228 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || || | |||| ||||| | || || ||| || | || |||||| || | Sbjct 229 CATAGACCTAAGAAAAGATCTCTTGTTCTCATCTCATCTAAACCTGTATTTTTTCGAAGT 288 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || |||||||| || |||||||||||||||| ||| Sbjct 289 TCTAGAAATTCAAAGATATCTGCATGCCATGGTTCCAAGTA 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396635462014400