Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10569 131 7e-28 seq12461 125 3e-26 >seq10569 Length=1209 Score = 131 bits (144), Expect = 7e-28 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||| ||| | ||||| ||||||||||| |||||||||||||||||| | ||||| Sbjct 439 TTGAGTTGGAGTGTGCCTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGA 498 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||| | |||||| | ||||||||| | |||| | ||| ||||||||||| |||| | Sbjct 499 AGCCCGGGGAAACCCAGGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGTATGA 558 Query 667 TTTGGGTATAGGGGCGA 683 ||||||||| || |||| Sbjct 559 TTTGGGTATCGGAGCGA 575 >seq12461 Length=1113 Score = 125 bits (138), Expect = 3e-26 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || |||||||||||||||||||||| | ||| ||| ||||| ||| | Sbjct 742 GAGCATATATGCTGTGACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 683 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| ||| Sbjct 682 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 623 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 622 TAGGGGCGA 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079582304150