Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq9000 113 4e-23 >seq9000 Length=5484 Score = 113 bits (124), Expect = 4e-23 Identities = 136/181 (75%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||||||| ||||||||| |||||||||||| |||| Sbjct 3109 GGTGGATGCCTTGGCGATGATAGGCGAAGAAAGACGTGATAGCCTGCGAAAAGCTTCGGG 3168 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126 || ||||| || | ||||||||| || |||| |||||||| ||||| | || | Sbjct 3169 GAGCTGGCAAATGAGCATTGATCCGAAGGTATCTGAATGGGGAAACCCACCCGAATGAGG 3228 Query 127 ATA----TATCATAACGC-TAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179 || || | || | |||| || |||||||| | |||||||||||||||||||| Sbjct 3229 GTATTACTAACTGAATACATAGGTTAGTGAGGCGAACCTAGGGAACTGAAACATCTAAGT 3288 Query 180 A 180 | Sbjct 3289 A 3289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476710054213