Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq9000 419 6e-115 seq6538 224 3e-56 >seq9000 Length=5484 Score = 419 bits (464), Expect = 6e-115 Identities = 279/310 (90%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1035 TACCATAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 1094 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||||||||||||||||||||||||| |||||||||||| || ||||| | ||| Sbjct 1095 GAGCGTTAATCGGAATTACTGGGCGTAAAGAGTGCGCAGGCGGCGATGCAAGACTGATGT 1154 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||||||||| ||||||||| |||||| ||||||||| || ||||||| |||| Sbjct 1155 GAAATCCCCGGGCTCAACCTGGGACCTGCATTAGTGACTGCATTGCTCGAGTGTGGCAGA 1214 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||||| ||||||| | ||||||||||||||||||||||||||| | ||||||||| |||| Sbjct 1215 GGGGGATGGAATTTCGCGTGTAGCAGTGAAATGCGTAGATATGCGAAGGAACACCGATGG 1274 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||||| || ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 1275 CGAAGGCAGTCCTCTGGGCCATTACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 1334 Query 303 GATTAGATAC 312 |||||||||| Sbjct 1335 GATTAGATAC 1344 Score = 405 bits (448), Expect = 1e-110 Identities = 278/314 (89%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 96 GCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTT 155 |||||| ||||| | |||| ||| ||||||||||||| ||| ||| ||||| ||||||| Sbjct 1347 GCGCAGACGGTTATTTAAGTCAGATGTGAAATCCCCGAGCTCAACTTGGGACGTGCATTT 1406 Query 156 GTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATG 215 | |||| ||||||||||||||||||| ||| |||||||| |||||||||||||||| Sbjct 1407 GAAACTGGGTAACTAGAGTGTGTCAGAGGGAGGTAGAATTCCATGTGTAGCAGTGAAATG 1466 Query 216 CGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTC 275 |||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||| || Sbjct 1467 CGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAGCCTCCTGGGATAACACTGACGTTC 1526 Query 276 ATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACG 335 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1527 ATGCTCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACG 1586 Query 336 ATATCAACTAGTTGTTGGGGATTTACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGAC 395 || |||||| ||||||||| ||||| || | |||||| |||||||||||||||||||| Sbjct 1587 ATGTCAACTGGTTGTTGGGAATTTAATTTTTCAGTAACGAAGCTAACGCGTGAAGTTGAC 1646 Query 396 CGCCTGGGGAATAC 409 |||||||||| ||| Sbjct 1647 CGCCTGGGGAGTAC 1660 >seq6538 Length=3451 Score = 224 bits (248), Expect = 3e-56 Identities = 245/320 (77%), Gaps = 4/320 (1%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| |||||||||||||||||||||||| ||| ||||||||||| Sbjct 1643 GAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTA 1702 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||| ||| |||| ||||| || || |||||| | ||||| ||| ||||||||| Sbjct 1703 TCCGGATTTATTGGGTTTAAAGGGTCCGTAGGCGGATTAGTAAGTCAGCGGTGAAATCCT 1762 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGT-GTGTCAGAGGGGGGT 189 ||| ||| ||| ||| | | ||||| | || || | || | || | | Sbjct 1763 ACAGCTCAACTGTAGAACTGCCGTAGATACTGCTAGTCTTGAATAGTAT-TGAAGTAGCC 1821 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 ||||| ||||||| ||||||||| ||||||| |||||||||| |||||||| Sbjct 1822 GGAATGTGTAGTGTAGCGGTGAAATGCATAGATATTACACAGAACACCAATTGCGAAGGC 1881 Query 250 AGCCCCCTGGGATAAC-ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 || || ||| | | ||||||| ||| ||||||||||||||||| ||||||||||| Sbjct 1882 AGGTTACT-AAATACCAATTGACGCTGATGGACGAAAGCGTGGGGAGCGAACAGGATTAG 1940 Query 309 ATACCCTGGTAGTCCACGCC 328 |||||||||||||||||||| Sbjct 1941 ATACCCTGGTAGTCCACGCC 1960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289348876192