Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq9000 545 7e-153 seq6538 156 1e-35 >seq9000 Length=5484 Score = 545 bits (604), Expect = 7e-153 Identities = 422/499 (85%), Gaps = 6/499 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct 1658 TACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 1717 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||||||| ||||||||| | ||||||| | || ||| Sbjct 1718 GTGGTTTAATTCGATGCAACGCGAAAAACCTTACCCACCTTTGACATGTACGGAATCCTT 1777 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGA-GTGACA--GGTGATGCATGGTTGTCGT 177 |||||||||||| | | ||| || || || ||| |||| ||||||| |||||| Sbjct 1778 TAGAGATAGAGGAGTGC---TCGAAAGAGAGCCGTAACACAGGTGCTGCATGGCTGTCGT 1834 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1835 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGT 1894 Query 238 TGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 1895 TGCCATCATTAAGTTGGGCACTCTAATGAGACTGCCGGTGATAAACCGGAGGAAGGTGGG 1954 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||| || ||||| ||||||| | ||||||||||||| |||||||| | Sbjct 1955 GATGACGTCAAGTCCTCATGGCCCTTATAGGTGGGGCTACACACGTCATACAATGGCCGG 2014 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 ||||||||| |||||| ||||||||| |||| |||||||||||| | || ||| |||| Sbjct 2015 TACAAAGGGTAGCGAAGCCGCGAGGTGAAGCCAATCCCATAAAGCCGGTCGTAGTCCGGA 2074 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477 | | |||||||||||||||| ||||| |||||||||||||||||| |||||| ||| Sbjct 2075 TCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGT 2134 Query 478 TACGGTGAATACGTTCCCG 496 |||||||||||||||||| Sbjct 2135 CACGGTGAATACGTTCCCG 2153 >seq6538 Length=3451 Score = 156 bits (172), Expect = 1e-35 Identities = 197/274 (72%), Gaps = 13/274 (5%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2093 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 2152 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | || || | || | | Sbjct 2153 GTGGTTTAATTCGANNNNNNNNNNNNNNNNGGGCTTAAATGGGAATTGCTTT-----ATT 2207 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | | | ||| |||| ||||| | ||||| ||||||||||||||||| Sbjct 2208 TGGAAACAAATATTT---CTTC---GGACAATTTTCAAGGTGCTGCATGGTTGTCGTCAG 2261 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| |||||| ||| |||||||||| |||||||||||||| || |||||| | Sbjct 2262 CTCGTGCCGTGAGGTGTCAGGTTAAGTCCTATAACGAGCGCAACCCCTATCATTAGTTAC 2321 Query 241 CATC--ATTAAGTTGGGCACTCTAAGTTGACTGC 272 |||| | |||| ||| ||||||| |||||| Sbjct 2322 CATCGAGTCAAGTCGGGAACTCTAATGAGACTGC 2355 Score = 150 bits (166), Expect = 5e-34 Identities = 127/155 (82%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 286 GAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGC 345 |||||||||||||| ||||||||||||||| | |||||| | ||||| |||||||||| Sbjct 2431 GAGGAAGGTGGGGATGACGTCAAATCATCACGGCCCTTACGCCCTGGGCCACACACGTGC 2490 Query 346 TACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT 405 |||||||| | |||| |||||||| | |||||| | || |||| | ||||| | Sbjct 2491 TACAATGGCCGGTACAGAGGGCAGCTACTGCGCGAGCAGATGCGAATCTC-TAAAGCCGG 2549 Query 406 TCTCAGTTCGGATTGTAGTCTGCAACTCGACTATA 440 ||||||||||||||| |||||||||||||||| || Sbjct 2550 TCTCAGTTCGGATTGGAGTCTGCAACTCGACTCTA 2584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503707126080