Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq3034 212 7e-53 seq9000 118 1e-24 >seq3034 Length=3327 Score = 212 bits (234), Expect = 7e-53 Identities = 134/149 (90%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 1609 GGGTCTTTTCGTCCCATTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCGAG 1668 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 |||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1669 CTCATGGTTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGA 1728 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 1729 CAAGGAATTTCGCTACCTTAGGACCGTTA 1757 >seq9000 Length=5484 Score = 118 bits (130), Expect = 1e-24 Identities = 116/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| |||||||| ||||| |||| | | | ||| ||| |||| Sbjct 5131 GGGGTCTTTCCGTCTATCCGCGGGTAGATTGCATCATCACAAACATTTCAACTTCGCTGA 5072 Query 84 GCTCAC-GGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | || ||||||| ||| |||||||||||||||||||||||||| Sbjct 5071 G-TCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 5013 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 5012 GACAAGGAATTTCGCTACCTTAGGACCGTTA 4982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547096773627