Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq9000 187 2e-45 seq6538 100 2e-19 >seq9000 Length=5484 Score = 187 bits (206), Expect = 2e-45 Identities = 138/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||||||||||| |||| ||||||| ||| | ||||||| Sbjct 2092 TCGAGTTGCAGACTGCGATCCGGACTACGACCGGCTTTATGGGATTGGCTTCACCTCGCG 2033 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || || |||| |||| ||||||||||||||||| ||||| ||| |||||||||| Sbjct 2032 GCTTCGCTACCCTTTGTACCGGCCATTGTATGACGTGTGTAGCCCCACCTATAAGGGCCA 1973 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||||||||||||||||||||||||||||||| |||| Sbjct 1972 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTATCAC 1932 >seq6538 Length=3451 Score = 100 bits (110), Expect = 2e-19 Identities = 113/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||| ||| || |||| | |||| || | |||||| Sbjct 2579 TCGAGTTGCAGACTCCAATCCGAACTGAGACCGGCTTTA-GAGATTCGCATCTGCTCGCG 2521 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || |||||||||| |||||||| ||||||| |||| | |||||||| Sbjct 2520 CAGTAGCTGCCCTCTGTACCGGCCATTGTAGCACGTGTGTGGCCCAGGGCGTAAGGGCCG 2461 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || ||||||||||||||||||||||| Sbjct 2460 TGATGATTTGACGTCATCCCCACCTTCCTC 2431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415921523810