Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq3034 136 3e-30 seq9000 100 2e-19 >seq3034 Length=3327 Score = 136 bits (150), Expect = 3e-30 Identities = 101/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| ||||||||||||||||||| | | |||||||||||||||| |||| Sbjct 1246 TACCTTTTATCCTATGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGTCCTG 1305 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||||| ||| || | |||||| |||| || |||||||| ||| ||||||| |||| Sbjct 1306 CTTTCGCACCTGATCGACTTGTTGGTCTCACAGTCAAGCACCCTTATGCCATTACACT 1363 >seq9000 Length=5484 Score = 100 bits (110), Expect = 2e-19 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 22 TGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAGTTG 81 |||||||||||| || | ||||||||||||| | ||| |||| | |||||| | ||| Sbjct 5484 TGGCCCTTCCATACAGAACCACCGGATCACTTAGTCCTAGTTTCCTACCTGCTCGACTTG 5425 Query 82 TTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATCACTACGATTTCCGACCGT 139 | ||||||| |||||||| ||| |||| |||||||| | ||||| ||||||||| Sbjct 5424 TCAGTCTCGCAGTCAAGCACGCTTATGCCTATGCACTATTAGCACGATGTCCGACCGT 5367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351935739100