Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq9000 152 5e-35 seq3034 125 7e-27 >seq9000 Length=5484 Score = 152 bits (168), Expect = 5e-35 Identities = 122/147 (83%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 33 TGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGAGCCG 92 |||||||||||| |||||||||||||||||| | ||| |||| |||||||||| | Sbjct 5484 TGGCCCTTCCATACAGAACCACCGGATCACTTAGTCCTAGTTTCCTACCTGCTCGACTTG 5425 Query 93 TCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGA 152 ||| |||||||||||||| ||||||||| ||||||| ||||||||||||||||| Sbjct 5424 TCAGTCTCGCAGTCAAGCACGCTTATGCCTATGCACTATTAGCACGATGTCCGACCGTGC 5365 Query 153 TTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||| ||||||| |||||||||||| Sbjct 5364 CTAGCGTACCTTCGAGCTCCTCCGTTA 5338 >seq3034 Length=3327 Score = 125 bits (138), Expect = 7e-27 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85 ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| | Sbjct 1260 TGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGTCCTGCTTTCGCACCTGAT 1319 Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145 ||| || |||| ||||||||| ||||||||||| |||| | |||| | || Sbjct 1320 CGACTTGTTGGTCTCACAGTCAAGCACCCTTATGCCATTACACTCTACGCACGGTTACCA 1379 Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | |||| | || ||||| | ||||||||| Sbjct 1380 AGCGTGCTGAGGATACCTTTGAAAGCCTCCGTTA 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473510657876