Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq4587 82.4 1e-13 >seq4587 Length=22293 Score = 82.4 bits (90), Expect = 1e-13 Identities = 134/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 102 AAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTT 161 || || |||| |||||| ||| ||| ||| | | ||||||||||||||||||| || || Sbjct 7874 AACGCCTCTT-GTGGAACTTCAACGGAGCCAATTTGCTTCATGCGTTTTTTACCAGCTTT 7816 Query 162 TTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTAC 221 ||| || || | || || || || || | | |||||||| |||||||| || || || Sbjct 7815 TTGTTTTTCCAAAAGTTTACGTTTGCGCGTAATATCACCGCCATAGCATTTCGCAAGCAC 7756 Query 222 GTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCTG 281 || || | | || || || | || |||| || || || ||||| || || || Sbjct 7755 ATTTTTCCGCATTGCTTTTACCGTTTCGCGTGCAACAATTTGGCCACCAATTGCAGCTTG 7696 Query 282 GATCGCGACGTC 293 || || || || Sbjct 7695 AATGGCAACATC 7684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838236738368