Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq9000 244 2e-62 >seq9000 Length=5484 Score = 244 bits (270), Expect = 2e-62 Identities = 247/320 (77%), Gaps = 1/320 (0%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||||||||||||||||| | |||||| ||| ||||| |||| ||||| | Sbjct 3100 AGAGCATGTGGTGGATGCCTTGGCGATGATAGGCGAAGAAAGACGTGATAGCCTGCGAAA 3159 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| | |||||||| || | || |||||||||||||| | Sbjct 3160 AGCTTCGGGGAGCTGGCAAATGAGCATTGATCCGAAGGTATCTGAATGGGGAAACCCACC 3219 Query 121 CCTTTG-GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179 | || || ||| | |||||||||||||| | | |||||| | ||||||||| Sbjct 3220 CGAATGAGGGTATTACTAACTGAATACATAGGTTAGTGAGGCGAACCTAGGGAACTGAAA 3279 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 3280 CATCTAAGTACCTAGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAA 3339 Query 240 TGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCA 299 | ||| |||||| ||||||| || |||| |||| |||||| | |||| Sbjct 3340 TTGGAGAAGCCTTCTAGAGATAGCACAAAGGATAACGGAACAGTCTGGAGAGGCTGGCCA 3399 Query 300 TAGCGGGTGATAGCCCCGTA 319 ||| |||||||||||||||| Sbjct 3400 TAGTGGGTGATAGCCCCGTA 3419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918221159968